Mycoplasmoides pneumoniae M129-B7: C985_0279
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Entry
C985_0279 CDS
T02596
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mpb
Mycoplasmoides pneumoniae M129-B7
Pathway
mpb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C985_0279
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpb03019
]
C985_0279
Messenger RNA biogenesis [BR:
mpb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
C985_0279
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B
RNase_J_C
RMMBL
Lactamase_B_2
Motif
Other DBs
NCBI-ProteinID:
AGC04206
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Position
331323..333032
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AA seq
569 aa
AA seq
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MIKDFDPSEFVGKTPTKIFAFGGIQEVGKNMYGIEYDDEIIIIDCGIKFASDDLLGIDGI
IPSFEYLIENQAKVKALFITHGHEDHIGGVPYLLKQVDVPVIYAPRIAASLILKKVNEHK
DAKLNKVVVYDDFSNFETKHFKIDFYRVNHSIPDAFGVCVQTPNGNIVESGDFRFDFAAG
GEMLDVHKVVKIAERNVHVFMCETTNAEIPGFSQSEKLIYRNINKIIKEARGRVILTTFA
SNITRINEIIEIAVNNKRKVCLLGKSMDVNVNISRKIGLMDIDSNDIVEVRDIKNYPDRS
ILILCTGSQGEDSAALNTMARGKHNWVSLKSTDTIIMSSNPIPGNYAAVENLLNELSKYG
VTIFENSPNMKLHASGHATQQELQLMLNLVFPRYLIPIHGEYKMMRTIKNIAQECGINGD
DVGLLANGQVMYLIDGKLYYSGEVINADPIYIESRNSSPDLARVIKQRQILSREGMFAVI
VVFDKNNNILGMPTLITRGCFFALDSSPLMTKITHSIKRGLENVIQNKRFNTREQMIKEL
KRVCKETVSYFIWKNKSRNPLISTVLSWV
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgattaaggattttgatcctagtgagtttgtcggtaaaactcctaccaagatttttgcc
tttggtggtatccaagaagttggaaaaaacatgtatggaatcgagtacgatgatgagatt
atcatcatcgactgcggtattaagtttgctagtgatgatctactagggattgatggtatt
atcccgagcttcgaatacctcattgaaaaccaagctaaggttaaagcactgtttatcacc
cacggccatgaagaccacattggtggggtgccttacttgttaaaacaagtcgatgtaccg
gtgatttacgcaccccggattgccgcttctttgatcttaaagaaggtcaacgaacacaag
gatgctaagctcaataaagtggtcgtatatgatgactttagcaactttgaaaccaagcac
ttcaagattgacttttaccgcgtcaaccactcgattcctgacgcctttggtgtctgtgtt
caaactcccaacggtaacattgttgagagtggtgactttcgctttgactttgccgctggc
ggggaaatgctcgatgtgcataaggtcgtgaagattgccgagcgcaatgtccatgtcttt
atgtgtgagactactaacgccgaaatcccggggttctcccagagcgaaaagttaatttac
cgcaacatcaacaagattattaaagaagcacgtggtcgggtcattctcactacctttgct
tccaacattacccggattaacgaaattattgagattgctgttaacaataaacggaaggtc
tgcttgttgggtaagtcgatggatgtgaacgtcaacatctcgcgtaagattggcttaatg
gacattgacagcaatgacattgtggaagtccgtgacattaagaattaccccgaccgcagt
atcttaatcttgtgtacgggttcccaaggtgaagactcagcagccttaaacacaatggca
cggggtaaacataactgggttagcttaaagtccactgacaccattattatgtcctccaac
ccgattccggggaactatgcagcggtggaaaatctcttgaatgagctttcgaagtacggg
gtgaccatctttgaaaactcaccgaacatgaagctacacgcctctggtcacgctacccag
caagagttgcagttaatgttaaacctcgtgtttccaaggtacttaattccgattcacggg
gagtacaagatgatgcgcaccatcaaaaacatagcgcaagaatgtggcattaacggtgat
gatgttggtttgctagctaacggtcaggtgatgtacctaattgatggcaagctgtattac
tcaggggaagtgattaatgctgacccgatttacattgaaagccgcaattcttctccagac
ttagcgcgggtaattaaacaacgccaaatcttgagtcgggagggaatgtttgctgtgatt
gtagtctttgacaaaaacaataacattttagggatgcctactctgattactcggggttgt
ttctttgctctagattccagtccgttaatgactaagattacccactcaattaaacgcggt
ttggaaaacgttattcaaaacaagcgttttaatacccgtgaacagatgatcaaggaattg
aaacgagtatgtaaggaaacggtgtcttacttcatttggaagaacaagagtcgtaacccg
ttgatttcaaccgtattgtcttgagtttaa
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