KEGG   Mycoplasmoides pneumoniae M129-B7: C985_0279
Entry
C985_0279         CDS       T02596                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
mpb  Mycoplasmoides pneumoniae M129-B7
Pathway
mpb03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mpb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    C985_0279
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mpb03019]
    C985_0279
Messenger RNA biogenesis [BR:mpb03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     C985_0279
SSDB
Motif
Pfam: RNase_J_b_CASP Lactamase_B RNase_J_C RMMBL Lactamase_B_2
Other DBs
NCBI-ProteinID: AGC04206
LinkDB
Position
331323..333032
AA seq 569 aa
MIKDFDPSEFVGKTPTKIFAFGGIQEVGKNMYGIEYDDEIIIIDCGIKFASDDLLGIDGI
IPSFEYLIENQAKVKALFITHGHEDHIGGVPYLLKQVDVPVIYAPRIAASLILKKVNEHK
DAKLNKVVVYDDFSNFETKHFKIDFYRVNHSIPDAFGVCVQTPNGNIVESGDFRFDFAAG
GEMLDVHKVVKIAERNVHVFMCETTNAEIPGFSQSEKLIYRNINKIIKEARGRVILTTFA
SNITRINEIIEIAVNNKRKVCLLGKSMDVNVNISRKIGLMDIDSNDIVEVRDIKNYPDRS
ILILCTGSQGEDSAALNTMARGKHNWVSLKSTDTIIMSSNPIPGNYAAVENLLNELSKYG
VTIFENSPNMKLHASGHATQQELQLMLNLVFPRYLIPIHGEYKMMRTIKNIAQECGINGD
DVGLLANGQVMYLIDGKLYYSGEVINADPIYIESRNSSPDLARVIKQRQILSREGMFAVI
VVFDKNNNILGMPTLITRGCFFALDSSPLMTKITHSIKRGLENVIQNKRFNTREQMIKEL
KRVCKETVSYFIWKNKSRNPLISTVLSWV
NT seq 1710 nt   +upstreamnt  +downstreamnt
atgattaaggattttgatcctagtgagtttgtcggtaaaactcctaccaagatttttgcc
tttggtggtatccaagaagttggaaaaaacatgtatggaatcgagtacgatgatgagatt
atcatcatcgactgcggtattaagtttgctagtgatgatctactagggattgatggtatt
atcccgagcttcgaatacctcattgaaaaccaagctaaggttaaagcactgtttatcacc
cacggccatgaagaccacattggtggggtgccttacttgttaaaacaagtcgatgtaccg
gtgatttacgcaccccggattgccgcttctttgatcttaaagaaggtcaacgaacacaag
gatgctaagctcaataaagtggtcgtatatgatgactttagcaactttgaaaccaagcac
ttcaagattgacttttaccgcgtcaaccactcgattcctgacgcctttggtgtctgtgtt
caaactcccaacggtaacattgttgagagtggtgactttcgctttgactttgccgctggc
ggggaaatgctcgatgtgcataaggtcgtgaagattgccgagcgcaatgtccatgtcttt
atgtgtgagactactaacgccgaaatcccggggttctcccagagcgaaaagttaatttac
cgcaacatcaacaagattattaaagaagcacgtggtcgggtcattctcactacctttgct
tccaacattacccggattaacgaaattattgagattgctgttaacaataaacggaaggtc
tgcttgttgggtaagtcgatggatgtgaacgtcaacatctcgcgtaagattggcttaatg
gacattgacagcaatgacattgtggaagtccgtgacattaagaattaccccgaccgcagt
atcttaatcttgtgtacgggttcccaaggtgaagactcagcagccttaaacacaatggca
cggggtaaacataactgggttagcttaaagtccactgacaccattattatgtcctccaac
ccgattccggggaactatgcagcggtggaaaatctcttgaatgagctttcgaagtacggg
gtgaccatctttgaaaactcaccgaacatgaagctacacgcctctggtcacgctacccag
caagagttgcagttaatgttaaacctcgtgtttccaaggtacttaattccgattcacggg
gagtacaagatgatgcgcaccatcaaaaacatagcgcaagaatgtggcattaacggtgat
gatgttggtttgctagctaacggtcaggtgatgtacctaattgatggcaagctgtattac
tcaggggaagtgattaatgctgacccgatttacattgaaagccgcaattcttctccagac
ttagcgcgggtaattaaacaacgccaaatcttgagtcgggagggaatgtttgctgtgatt
gtagtctttgacaaaaacaataacattttagggatgcctactctgattactcggggttgt
ttctttgctctagattccagtccgttaatgactaagattacccactcaattaaacgcggt
ttggaaaacgttattcaaaacaagcgttttaatacccgtgaacagatgatcaaggaattg
aaacgagtatgtaaggaaacggtgtcttacttcatttggaagaacaagagtcgtaacccg
ttgatttcaaccgtattgtcttgagtttaa

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