Marinomonas posidonica: Mar181_1628
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Entry
Mar181_1628 CDS
T01508
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
mpc
Marinomonas posidonica
Brite
KEGG Orthology (KO) [BR:
mpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpc03400
]
Mar181_1628
DNA repair and recombination proteins [BR:
mpc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Mar181_1628
Archaeal homologous recombinant proteins
Mar181_1628
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
ABC_tran
AAA_21
RsgA_GTPase
MMR_HSR1
AAA_22
nSTAND3
DUF87
Motif
Other DBs
NCBI-ProteinID:
AEF54667
UniProt:
F6CZD0
LinkDB
All DBs
Position
1756996..1760688
Genome browser
AA seq
1230 aa
AA seq
DB search
MKICKLRLKNINSLKGEWEIDFTKAPFDDAGVFAIVGPTGAGKSTLLDAICLALYHETPR
LKVSPSQNELMTRHTAECIAEVEFEIKGKGYRAFWGQRRARGSSDGKLQPMTCELCERDG
SIITTKINEKIEKIAEITGLDFSRFTKSMLLAQGGFSAFLNASANDRAELLEELTGTEIY
GQVSQWVFEKHKSERQKIAQLEAVNAQRQLLSDEELQALVEQEKTYSAQEKTLSESVKQH
KQHLDWRQAEARLAKQLAMHTQQHDEAVAAVEAFKPKQTALDNAAVANALLGQHQSLKDV
QRRVVELETEQTEVSKKHLEQNQVFKTADEHTEQRQQTFDEQTAQWEALNEEIAKVIQPL
VSRRDSVNEQLMEANNRRLVIEQKHADSLKALEQKKTKANEVRLAAQQSQQSLSEWQTPE
KIEAQVTNWLYQQGAIQALDQTLMGLSAEVSSAKESLDSALNSFAASKKGVEQQKSNTAA
MEGQLKERVEEFLGLSSGREWGDWQEHFRHEEAKQQKAVELVSRYESYQAKCQQAQEIDH
SIGELNNQLALQEQQLVQQRLTYKEKNAHLNDLTKLVDAERHILVLNELRVALEDHQPCP
LCGSHEHELGQAWYQEVNQENQQRLEQLKSDLDELVQVGQGLKANQQVLTRELEMRQDQR
LTLVSELSATEAELLALLNGLMVSDPVEVLDGNHISSCVDRVQQAWSHVNDLNVILLEKH
QQRVALEEQLTMSQTQLQHMTLQLQESESQGRLLRHTLESKQADHQKTASEKERIHSELM
TSLVEAEVPERYLSSPLSESLLALQTSLQTWREAKANYDTQVQQEEQLAYELVSLEERVK
ESQLQVNEVVSLVSEQANTLSELDTELDKRLKGKTLAAFRADVQQALMQKREEYDAAVKE
RELVQTKLATLSASLKAIEKSLVSLKKDLELVDSVWQNALQEKGFGSDLDWQSACLSEAE
FTLLQQLSSDLKDAITRQTALLKQSEQACLEHAQSKPKNDPLDSIALDELVASVERIESQ
QQQLNRSLGEVSQKIREEVQRREQAQASAEELNALREELVHLDRLNHLIGSADGAKFRRF
AQSLTLDHLVYLANQHLVILHRRYQLKRQAEALSLAVVDTWQADVSRDTKTLSGGESFLV
SLALALALSDLVSHKTSIDSLFLDEGFGTLDSETLESALDALDNLHSSGKTIGIISHISA
LKERIPVQIKLTKQSGLGVSRLASEFAVTD
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatttgtaagcttcgtctgaagaacattaattccctaaaaggtgaatgggaaatc
gattttaccaaagcgccgtttgatgacgctggtgtgttcgccattgttggtccaactggg
gcgggtaagtcgaccttgctggatgccatttgcttggctctgtatcacgaaacgccacgc
ttgaaagtctcacccagtcagaatgaattgatgacgcgccatacggctgaatgtattgcg
gaagtggaatttgagattaaaggcaaaggttaccgtgctttctgggggcagcgtcgagca
cgtggcagcagtgacggtaagttacaaccaatgacctgcgagttgtgtgagcgggatggc
agcattattaccactaagataaacgagaaaatagagaaaatagcagagatcacagggtta
gatttttctcgttttactaagtccatgttactggcgcaagggggattttcggcctttctc
aatgcgtctgctaatgacagagcggagctgctggaggagttaacgggcacggaaatttat
ggtcaggtgtctcaatgggtatttgaaaaacataaatctgaacgtcagaaaattgcgcag
ttagaagcggtgaatgctcaacgtcaattattgagtgacgaggagttgcaggcgctggtt
gagcaagaaaagacgtattctgcgcaagagaaaacactctcggagagcgtaaagcagcat
aagcaacatttagactggcgtcaggccgaggcaaggcttgcaaagcagttggctatgcat
actcagcaacatgacgaagcggttgcggctgtggaggcatttaagccgaagcaaactgca
ttggacaatgccgctgtggcgaatgctttgctaggtcagcatcagagcctgaaagacgtg
cagcgccgagttgtggaacttgaaacggagcagacagaggtttcgaaaaaacaccttgag
cagaaccaggtttttaaaacggcagatgagcataccgagcaacgacagcagacctttgat
gaacaaacggctcaatgggaagcgctgaacgaagagatagcgaaggtgattcagcctttg
gtgtctcgtcgagacagtgttaatgaacagctgatggaagccaataatcgtcgccttgtt
atagaacaaaagcatgcagacagcctaaaagcgttagagcagaagaaaaccaaagcgaac
gaggttaggttggcggcgcagcaaagccagcagagtttgtctgaatggcaaacgccagaa
aagattgaggcgcaagttactaactggttgtatcagcaaggggcaattcaggcgctagat
caaaccctaatggggttatcggcggaggtgtctagtgccaaagagtctcttgattcggct
ttgaattcatttgccgccagtaaaaaaggcgtcgaacagcaaaaatccaataccgccgcc
atggaagggcaattgaaagagcgggtggaggaatttcttggcttatcctctggtcgagaa
tggggggattggcaagagcatttccgtcatgaggaagcaaagcagcaaaaagctgtggag
ctagtgagtcgctatgagtcttatcaagctaagtgccaacaagctcaagaaattgatcac
tctattggtgagttaaacaatcaactggcgttgcaagaacagcagctggttcagcaaaga
ctgacttacaaagagaaaaatgcccatttaaacgatttaaccaagctggtggacgccgaa
cgtcatatccttgtgttgaatgaattacgtgttgcactggaagatcatcagccttgtccc
ttgtgtggttcccatgagcatgagttgggtcaggcttggtatcaagaagtgaaccaggaa
aaccaacaaagattggagcaattgaagtctgatttagatgaattggtacaagttgggcaa
gggttgaaggcgaatcagcaggtgttaacccgtgagctggaaatgcgacaggatcaacgc
cttacgctagtgagtgagttatcagcaacggaggcggagctgctggcattgttaaatggc
ttgatggtcagtgatccggtcgaagtgttggatggtaatcatatttcaagctgtgtcgat
agggttcagcaagcttggagccatgtgaatgatctgaatgtcatcttgctcgaaaagcat
cagcagcgtgtggcattagaagagcaattgaccatgagtcaaactcaactgcaacacatg
accttgcaacttcaggagtcggaatcccaaggtcgcttactccgtcataccttagagtca
aaacaggcggatcatcaaaaaacggcttcagagaaagagcgtattcacagtgagttgatg
acttcccttgtagaggctgaggtgccggagcgttatctgtcttcgccattgagtgaaagt
cttctggccttgcaaacgtctttgcagacgtggcgagaagccaaggcgaattatgatacg
caggttcagcaagaagaacagcttgcttatgagttagtgtcgttagaagagcgagtcaaa
gagagtcagcttcaggtgaatgaggtggtgtcactagtgagcgaacaggccaacaccttg
agcgaattggatacagagttagataaaaggctgaaaggcaaaacgttggcggcattccgt
gctgatgttcagcaagccttgatgcaaaaacgcgaagagtatgacgcggcggtaaaagag
cgtgagctggttcaaaccaaattggcgacattgtcggcaagtttgaaagcaattgagaag
tcccttgtttccctgaaaaaagaccttgaacttgtggattcggtttggcaaaacgcgttg
caagagaaaggctttggaagtgacttagattggcaatctgcttgcctgtccgaggctgaa
tttaccttgctgcaacagctttctagcgatttaaaggacgccataacccgccaaaccgcc
ttgctaaaacaatcggaacaagcgtgtcttgagcatgctcaatccaagcctaaaaatgat
ccgcttgatagtatcgcgcttgatgagctagtggcttcggtggagcgtattgaaagtcag
caacaacagttgaatcgcagcttgggagaggtttctcagaaaatacgtgaagaagtgcaa
cgacgtgagcaagcgcaagcgtccgcagaggaactcaatgctttacgtgaagagttggta
catcttgatcgattgaatcatttaattggttcggctgatggtgctaagttccgtcgcttt
gcgcaaagtctaacactggatcatctggtgtatttagccaatcagcatttggttattttg
catcgtcgttatcagttgaaaagacaagcagaggccttgtccttggcggtggtggatact
tggcaagcggatgtttctcgcgatactaagaccttgtcgggtggggagtctttcttggtg
agtctggctttggctttggcgctgtcggatttggtgtctcataaaaccagtattgattca
ttgtttcttgatgaaggctttggcaccttggacagcgaaaccttggaatcggccttggac
gccttggacaatttgcattcatcaggaaaaaccattggcataatcagtcacattagtgcg
ttgaaagaacgaattcctgtgcaaattaagttaacgaaacaaagtggtttgggggtgagt
cgattagcgtcagaatttgccgtcacagattga
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