Marinomonas posidonica: Mar181_1941
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Entry
Mar181_1941 CDS
T01508
Name
(GenBank) Exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
mpc
Marinomonas posidonica
Pathway
mpc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mpc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Mar181_1941
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpc03400
]
Mar181_1941
Enzymes [BR:
mpc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
Mar181_1941
DNA repair and recombination proteins [BR:
mpc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Mar181_1941
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Mar181_1941
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Mar181_1941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AEF54979
UniProt:
F6CSC5
LinkDB
All DBs
Position
complement(2115355..2116809)
Genome browser
AA seq
484 aa
AA seq
DB search
MTAAGPTSFFWFDFETTGTDPARDRPMQFAGIRTDLNFNPIGEPVMFYCRLAEDTLPQPE
ACLLTGISPQEANRDGLCEAEFMQAVEAELSVPGTCALGYNTIRFDDEVVRHGFYRNFID
PYAREWQNNCSRWDMIDLVRMTYAMRPDGIVWPKKEDGQVSMKLEDLTKANNIAHEQAHD
ALSDVYGTIEIAKLIQDKQPKLFAYYFKMRQKHELQQFIDPVRMKPFLHISGMFGQARHY
AAFVVPVAPHPTNKNGIIVWDLMEDAQPLLELSVKEIQHRVFTRQDELGDISRLPLKVIH
YNRAPAVAPATFLKDEQIVNRLGLDGDKCRHNLAMIKQHTGLAAKLSDVFVQEERTIDKD
PDLMLYSGGFFSREDKTRMDTIRSTPAEHLTELSLSFDDRRLPEMLTRYIGRNYPEQLTE
QQRQEWEEYRQIRLLETDGGGSITMAQYFDRLNAIAQTPDLSSRQQIMLQDLADYAQSIY
PMDM
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
gtgactgcagcgggcccaacgtcatttttttggtttgattttgaaacaacaggaacggac
ccagcaagagatcgtcctatgcaatttgccggcattagaaccgatcttaattttaatcct
attggtgaacctgtcatgttttactgccgtctggcagaagatacactgcctcagccagag
gcctgcttattaaccggtattagtccgcaagaagcgaaccgtgatggtttgtgtgaagcg
gaatttatgcaagcggttgaagccgagttatctgttcctggtacctgcgctcttggttac
aacaccatacgctttgacgacgaagtggtacgtcacgggttttatcgtaactttatcgat
ccctacgctcgtgaatggcaaaataattgttcccgttgggatatgatagatttggttcgt
atgacgtacgccatgcgcccggatggcattgtttggcctaagaaagaagatggccaggta
tcgatgaagctagaggatttgaccaaggcgaacaacattgctcatgaacaagctcatgac
gccttgtctgatgtctatggcaccattgaaatagcgaaattgattcaggataagcaacct
aaattatttgcttattatttcaagatgcgtcaaaagcatgaacttcagcaattcattgac
cctgttcgtatgaagccttttttgcatatttcgggcatgtttggacaggcacggcattat
gctgcgtttgtggtgcctgttgcgccacatccaaccaataaaaatggcatcattgtgtgg
gatctcatggaagatgctcaacctttgttagagttgagtgttaaagaaatccaacatcgt
gtttttacccgacaagatgagcttggtgatatatcccgtttacctctcaaagtgattcac
tacaatcgtgcacctgcggtggcgcctgcaacctttttaaaagatgagcagatcgtgaat
cgactcggattagatggtgacaaatgtcgtcacaatcttgccatgattaaacagcatact
ggtttggctgcgaagctaagcgatgtgtttgttcaagaagagcggacgattgataaagat
cccgatttaatgctttattcaggcggtttcttttctcgagaagataaaactagaatggat
accattcgatcaacgcctgcggagcatttaactgagctgagtttatcatttgatgatcga
cgcttgcctgaaatgttgacgcgttacataggtcgtaactatccagaacaattaaccgaa
caacaacgacaggaatgggaagaatatcgtcaaattcgtttattagagacggatggtggt
ggttcaattacgatggcacaatattttgatcgcttaaatgccatcgcccaaacacccgat
ttatcaagtcgtcagcaaatcatgctgcaagacttagcggattatgcgcaaagtatttac
ccaatggacatgtaa
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