Marinomonas posidonica: Mar181_1979
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Entry
Mar181_1979 CDS
T01508
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
mpc
Marinomonas posidonica
Pathway
mpc02020
Two-component system
mpc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mpc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Mar181_1979
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Mar181_1979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpc03021
]
Mar181_1979
Transcription machinery [BR:
mpc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Mar181_1979
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AEF55017
UniProt:
F6CSG3
LinkDB
All DBs
Position
2150611..2152101
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AA seq
496 aa
AA seq
DB search
MKQSLQLKLGQQLTMTPQLQQAIRLLQLSTLDLKQEIHEFLESNPLLELDDDETTSPELP
TSIEAKTDTETNKDNNLNDNESGEEARLESEWTESIPEELSIDSNWDDTYQSSAAVSDSN
SFDNEMDFESRNAPAESIQDHLIWQLNLTHMSDRDLEIAYAIVDCVQPDGYLSTTLEDIL
ESLSLDLEELELDEIHAVQHRLQRFDPIGVCSTDLRDCLLVQFEAFQDHPLYKSTQNLIS
HYLPLLGSRDFVQLSRKTKLKDEALKEVIHLIQQLNPRPGSAIDEDDTDYVIPDVSVKKR
NGTWQVELNNDALPPIKINETYSAMANTASTAEDVSYIKNSLQEAKWFMKSLQSRNETLL
KVASCIVSRQIDFFELGEEAMKPMVLHDVAEEVGMHESTISRVTTQKYMHTPKGIFELKF
FFSSHVNTASGGECSSTAIRAMIKKLVADEPAKKPLSDNKLATILADQGIQVARRTVAKY
REAMNIPPSNERKRLI
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagtctttacagctaaagctcggtcaacaattaaccatgaccccacaactgcag
caagccattcgcttgctgcagctttcgacgctggatttaaagcaggaaattcacgaattt
cttgaatctaatccattactcgagctagacgatgacgaaaccacatcgcctgaacttccc
actagcattgaagcaaaaacggacaccgaaaccaataaggacaacaatctcaatgataat
gaatcaggcgaagaagcacgtttagaatccgagtggacagaaagcatccctgaagaactc
tccattgatagtaattgggatgacacttatcaaagttctgcggcggtcagtgattccaat
agttttgacaatgaaatggacttcgaaagccgcaacgccccggctgaaagcattcaagac
catttgatctggcaattgaacctcactcacatgtccgatcgagacctggaaattgcttac
gctattgtggattgtgttcaacccgatgggtatttaagcaccacgctagaagacatttta
gaatctttaagcttggaccttgaagagctcgagctagatgagattcacgccgtacaacac
agattacaaaggtttgatcctattggcgtatgctcaaccgacctacgcgattgcctactg
gttcaatttgaagcgtttcaggatcaccctctttataaaagcacacaaaatctgattagc
cattatctacctcttttaggcagccgagactttgtccaactaagtcgcaaaaccaagcta
aaagacgaagcgttaaaagaagtcattcatctaatccaacaacttaaccctcgacctggc
tccgccatcgatgaagacgatacggattatgtgattcctgatgtttcagtcaaaaaacgc
aacggcacctggcaggttgagttaaataacgacgctttaccacctattaaaatcaatgaa
acctactctgccatggcaaataccgcgtcaacggcagaagatgtcagctatattaaaaac
tctctacaagaagccaaatggttcatgaagagtttacaaagccgtaatgaaacactgtta
aaagtcgctagctgcattgtcagtcgacaaattgatttctttgaattaggtgaagaagcc
atgaaacccatggttcttcatgatgttgcggaagaagttgggatgcacgaatcaacgatc
tcacgtgtcaccacgcaaaaatatatgcacacaccaaaaggcatttttgagctgaaattc
ttcttctccagccatgtaaacaccgcttctggtggcgaatgttcttccaccgcgattcga
gctatgattaaaaagttggtcgccgatgaacctgctaaaaaaccgttaagcgataacaaa
ttggccaccattttagccgatcaaggcattcaagttgcacgacgaaccgttgcaaaatat
cgagaggcgatgaacatccctccttcaaatgaacgtaaaagattgatttaa
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