Marinomonas posidonica: Mar181_2559
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Entry
Mar181_2559 CDS
T01508
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
mpc
Marinomonas posidonica
Pathway
mpc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mpc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Mar181_2559
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpc03400
]
Mar181_2559
Enzymes [BR:
mpc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Mar181_2559
DNA repair and recombination proteins [BR:
mpc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Mar181_2559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Lipoprotein_7
Motif
Other DBs
NCBI-ProteinID:
AEF55590
UniProt:
F6CXH4
LinkDB
All DBs
Position
complement(2831508..2834861)
Genome browser
AA seq
1117 aa
AA seq
DB search
MFRLYTGNRLEDLAVLLAKILAVSPPDNPFDDEHILVQNPGMAQWLKMRLAESHSISAGL
TFPLPSTFVWHTFKQALSDIPPQSEFNKPFLVWRLMRILEFRLAEPEFAALAWYLSEDDS
QVRCFQLCSSIADIYDQYLVYRPDWIAAWEANHVDDPFLQQHFLEQPWQAILWRDLVSDI
SQQGASLYHRGNLIEALTEACASGVRPSGVPERIFIFGVSSLPPNTLESLRVLADSGWIE
MHLFLQNPCRFYWGDIVDKHYLGREIKRQNVKPGLRLEALHLDANPLLASWGRLGRDYIG
QLQDIANDELEVFEDYQTSDRSGLLQWVQQDVLTLENHGAQQETDLHLSNSGYRHPIAAD
DQSIRVHVCHSPLREVEVLHDQLLDMFERDPQLTPKDIIVMLPDVNTYSPFVRAVFGQAE
GNKHIPFALIDQSGGMENPIVDAYLYLLGLGESRFTLSELISVLEVPAVMARFDLSAHEL
DRIRQWSVEVGIRWGLDEQTAQQHQLPKQVSHTWLNGVRRMLLGYAMGHDHIWQETLSYG
DVEGLEAVVAGKLAEFLALIHQAQESLQQPLQPSGWVKTLYALADDFFLLEEQDTFRELL
SNQLDALMSEWQHAQYNDVLDQLVVRQLLAPRLQESQGSQRFLAGRVNFCTLMPMRSVPF
KVICVLGLNEGDYPRSVAPMGFDLMVGHYRSGDRSRREDDKYLFLEALMSAREVFYLSYV
GRSIQDNSEKNPSILLSELLEYLGQSCVFDEDQDLAPDSSQQAFLHKVVTEHPLQPFNRL
YYQMGNSPSVFYSFNQHWLPALMTKKQDVERDVSPLATFEQGTDTLALDEIVRFMSHPTR
YFTQRRLKAYLSLKEEQELEDEPFTLDGLTGYQLKDALLQAMLNGEEQVFLQRLALTGVM
PYGAFGRLSLAQSQQQCRQLYQVLQGYDLAKLPPLEVHLSLGALTLQTWLDMPTATTRLS
YRMGDVSANQKMRFWIEHLALCAQGTAKQHHLINLLKTGKLLEHEFVILPPNEAQVHLLE
LTALLQSGLSQPLPLPAKSADAWCKSYCASKTAEDHDAAWSQALKTYQESTSAFTSSEVE
DAYWQRYFPDLTAHKAHFVCLCEQVWLPMHRHLEQAE
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgtttcggctatatacaggtaatcggttagaggatctggctgtattactggcgaagatc
ttggcggtatcaccgccagacaacccatttgatgacgaacacattctggtgcagaaccct
ggtatggcgcagtggttaaaaatgcgcttagcggaatctcattccatttcagccggatta
acctttcctctgccgtctacttttgtttggcatacctttaaacaagctttatctgatata
ccgccacaaagtgaatttaataagccgtttttagtttggcgcctaatgcgcattttagaa
ttcaggttggctgagcctgagtttgcggcgttagcttggtatctcagtgaggatgacagt
caggttcgatgttttcaactgtgtagcagtattgcggatatttatgatcaatatttggtg
tatcgaccagattggattgccgcttgggaggccaatcatgttgatgatccatttttacag
cagcattttttagaacagccttggcaagccattttatggcgcgatctcgtctcagacatc
agtcagcaaggtgcctctctttatcaccgtggtaatttaatcgaagctctaaccgaagcc
tgtgcatcgggcgtgcgaccaagtggtgtaccggagcgaatctttatttttggggtgtct
tccttaccgcccaataccctagagtctcttcgtgtcctggcagattctggttggattgag
atgcacttatttctacagaatccgtgtcgtttttactggggcgatatagtggataagcat
tatcttgggcgtgaaattaagcgtcagaatgtaaagccgggtttgcgattagaggcgtta
caccttgatgctaaccctttgctcgccagttggggacgcttaggaagagattacataggg
caactacaagacattgcaaacgatgaattagaggtgttcgaagattaccaaacatctgat
cgctcagggcttttacaatgggttcagcaggatgttttaacccttgaaaaccatggcgcg
caacaagaaaccgatcttcatttaagtaacagcggctatcgacatccaatcgcagccgat
gatcagagcattcgtgtgcatgtgtgccacagtccgttacgagaagtggaagtattgcac
gatcaattgctcgatatgtttgagcgtgatccacagctgacgccgaaagacatcattgtt
atgttgccggatgtgaatacttacagcccgtttgttcgtgctgtgtttggtcaagctgaa
ggcaataaacacattccattcgcgctgattgatcaatcaggtggcatggaaaaccccatt
gttgatgcgtatttatatctgttgggattgggcgaaagtcgctttaccttgtcggaattg
atcagtgtcttagaagtgccagcggtaatggcccgctttgatctttccgctcatgagctt
gaccggatccgtcaatggtcagtggaagtgggtattcgttggggattggatgaacaaacg
gcacaacaacatcagctgccaaaacaagtctctcatacttggctaaatggtgtccgtcgt
atgttgttggggtatgccatggggcacgatcatatttggcaagaaaccttgagttatggg
gatgtcgaaggattagaagcggtggtcgctggtaagctcgctgaatttctggcgttgata
catcaagcacaagagagtttacagcaaccactgcaaccgagtggctgggtgaaaaccttg
tatgccttggcggacgattttttcttactggaagaacaggacacatttcgagagttattg
tcgaatcagcttgatgcgttaatgtcggagtggcagcatgcccaatataacgacgtttta
gaccaattagtggtcagacaattgctcgcgccaaggctacaagaatcgcaaggtagtcag
cgatttttagccggccgagtcaacttctgcaccctgatgccaatgcgttctgtgccgttt
aaagtgatctgtgttttagggttaaacgagggagattatcctcgcagtgtggcgccgatg
ggctttgatttgatggttggccattatcgcagtggtgaccgtagtcgccgtgaagacgac
aaatacctcttcctagaagccttaatgtctgctcgagaggtgttttacttgagctatgtc
ggtcgcagtattcaggacaacagcgagaaaaatccatccatcttattgagcgaattactg
gagtacttaggtcagagttgtgtctttgatgaggatcaagaccttgcgccagatagttcg
caacaggcttttttacataaagtggtgactgaacacccattacagcctttcaaccgactg
tattatcaaatgggaaatagcccgtccgttttttacagttttaaccagcattggctgcca
gccttgatgacgaagaagcaagacgttgagcgagacgtttcacctttagccacgtttgag
caaggtaccgatacattggctttagatgaaatagtgcgctttatgagtcatccgacgcgt
tattttactcagcgtcggctgaaagcgtacttgtccttaaaagaagagcaagagctggaa
gacgaaccctttacacttgatggtttaacgggttatcaattaaaagatgccttattacaa
gccatgttgaatggcgaagagcaagtgtttttacagcgtttagcactgactggcgtgatg
ccatacggtgcgtttggccgcttatccttggcgcaaagtcagcaacaatgtcgtcagctc
tatcaagttctgcaaggatacgatttggcaaagttaccgccgttagaagtgcatttgtcc
ttgggtgctttgaccttgcaaacttggttagatatgccgacggctacaacgcgtttgtcc
tatcgtatgggggacgtgtctgccaatcaaaaaatgcgcttttggattgagcatttggca
ttgtgcgcgcaaggtactgccaagcaacatcatctgattaatctgctgaaaacgggcaag
ctgcttgaacatgagtttgtgatattgccacccaatgaggctcaagtgcatctgcttgag
ttgactgccttattgcaatccggtttgtctcagcctttgcctcttccagcaaaaagtgcc
gatgcttggtgtaaaagctattgtgccagcaaaaccgcggaagaccatgatgcggcttgg
tcgcaggctttaaaaacctatcaagaaagcaccagtgcgtttacgtcaagcgaagtagag
gatgcttattggcaacgttatttccctgatctaacggcacacaaagcccattttgtttgc
ctttgtgagcaggtttggttgcccatgcatcgacatttggagcaagctgaatga
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