Marinomonas posidonica: Mar181_2597
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Entry
Mar181_2597 CDS
T01508
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD subfamily
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
mpc
Marinomonas posidonica
Brite
KEGG Orthology (KO) [BR:
mpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpc03021
]
Mar181_2597
Transcription machinery [BR:
mpc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Mar181_2597
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
DUF4423
Motif
Other DBs
NCBI-ProteinID:
AEF55628
UniProt:
F6CXZ6
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Position
complement(2880203..2881198)
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AA seq
331 aa
AA seq
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MKLASMDKSAAKVSNARDFDLDTLDGYQEEGADEEFESAVNARYAEADSSKSLDVTQLYL
SEIGFSPLLSAEEEVYFARLALKGDEKARKRMIESNLRLVVKISRRYLNRGLSLLDLIEE
GNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHVVKELNVYLRAA
RELTQTLDHEPSPEEIADKLDCPVEDVQKMLGLNEKISSIDASFGGENNDKSLVEVLADD
LHQGPEADRQDGDVLQGIEQWLDELSEKQCEVITRRFGLRGHEASTLEHVGAEIGLTRER
VRQIQVEALRKLRLILDKEGLSLDDVIGINE
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaagttagcaagtatggataaaagcgcagctaaggtctcgaacgccagagactttgac
cttgatacactagatggctatcaagaagagggagcggatgaagaatttgaatccgctgtt
aatgctcgatatgcggaagcagactcttctaaaagtttggatgttactcagttgtatttg
agtgagatcggtttttcacctcttttgtccgcagaagaagaggtttattttgctcgcctg
gcattgaaaggtgatgagaaagcacgcaaacgtatgatcgaaagtaatctgcgtttagtg
gtgaaaatctctcgacgttatctcaaccgtggtctgtcgctacttgatctgattgaggaa
gggaatttagggctcatcagagctgtggaaaagtttgaccctgagcgaggttttcgtttt
tcaacttacgcgacatggtggatacgccagaccattgagcgtgccatcatgaaccaaacc
cgaacgattcgtttacctattcatgttgtaaaagaacttaatgtgtaccttcgggctgct
cgtgaattgactcaaacgttagatcacgaaccgagccctgaagaaatcgcagacaagctt
gattgtcctgttgaagatgtgcaaaaaatgttgggactgaatgaaaaaatcagttctatt
gatgcgtctttcggtggtgaaaataacgataaaagtttagttgaagtcttggcggatgac
ttacatcaagggccagaggcggatcgtcaggatggtgatgtgctgcaaggcattgaacaa
tggcttgacgagttaagtgagaaacagtgtgaggtgattacgcgccgttttggactacgt
ggacatgaagccagtacccttgagcatgtcggtgcggaaattggtttaacacgggagcgt
gtacgtcagatacaagtagaagcgttacgcaaattacgtctgatcctagataaagagggt
ttgtcactggacgatgtgattggcataaatgaataa
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