Marinomonas posidonica: Mar181_3030
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Entry
Mar181_3030 CDS
T01508
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mpc
Marinomonas posidonica
Pathway
mpc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mpc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Mar181_3030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpc03400
]
Mar181_3030
Enzymes [BR:
mpc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Mar181_3030
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Mar181_3030
DNA repair and recombination proteins [BR:
mpc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Mar181_3030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
AEF56057
UniProt:
F6D1G8
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All DBs
Position
complement(3348281..3349099)
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AA seq
272 aa
AA seq
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MPELPEVETTLRGIEAHLVGRKLVQVDIRQPQLRWLITPELRTEMVGQEITHLSRRGKYI
GIHTAKGTLIIHLGMSGSLYFVPANTPPLFHDHVDFCFAGDGDWLRYTDPRRFGAILWTT
EDWQTHDLLRHLGPEPLTDDFNVDYLYAKAKGRKMPIKTFIMDSKVVVGVGNIYANEALF
KAGIRPNRMAGNISKVRMRKLVECIKIVLANAIKQGGTTLKDFVGGDGKPGYFKQELAVY
GRAGLPCTQCQKVLTEVRQAQRSTVYCAKCQT
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattaccggaagtagaaaccacactgcgtggcattgaagcgcatttagtcggg
cgaaaacttgttcaagtggatattcgccagccgcaattacgctggttgattaccccagag
ttgcgcactgaaatggtggggcaagaaattactcacttatcacgacgtggaaaatacata
ggtattcataccgccaaaggtactttgatcattcatttaggcatgtcaggcagtttgtat
tttgtgccggccaatacaccacctttgtttcatgatcatgtggacttttgttttgcgggt
gatggtgactggttacgctataccgacccaaggcgtttcggtgctattttgtggaccacc
gaagattggcaaactcatgatttattacgtcatcttggtcctgagcctttaacagatgac
tttaatgtggactatctatacgccaaagctaagggacgtaaaatgcccatcaagactttt
attatggacagtaaagtcgtggttggggtgggcaacatatacgcaaatgaagcgttgttt
aaggccggtattcgcccaaatagaatggcgggaaatatttccaaagttagaatgcgtaaa
ttggttgagtgcattaaaatagtgcttgccaatgccatcaagcagggcggcaccacatta
aaagattttgtcggtggtgacggtaagcctggttactttaagcaagagttggcggtttat
ggtcgagctggcctgccatgtacccagtgtcaaaaggttttgacggaggttcgacaggca
caacgcagtacagtgtattgtgcaaaatgccaaacctga
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