Marinomonas posidonica: Mar181_3285
Help
Entry
Mar181_3285 CDS
T01508
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
mpc
Marinomonas posidonica
Brite
KEGG Orthology (KO) [BR:
mpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpc03019
]
Mar181_3285
Enzymes [BR:
mpc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Mar181_3285
Messenger RNA biogenesis [BR:
mpc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Mar181_3285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
DEAD
Helicase_C
ResIII
Flavi_DEAD
AAA_19
AAA_30
CON_HrpB
HA2_C
Motif
Other DBs
NCBI-ProteinID:
AEF56305
UniProt:
F6CTT6
LinkDB
All DBs
Position
3614720..3617251
Genome browser
AA seq
843 aa
AA seq
DB search
MTSSLPIHAILPDLLQTLLEQDQAILEAAPGAGKTSVVPLALMDQAWNQGRKIVMLEPRR
LAAKAAAKRLADTLKEPVGKHIGYRIRHDTKESKETQVLVVTEGVLTRMLQDDPSLSDIS
LVIFDEFHERNLHSDLAFALCLQARELYRDEDPLKLLVMSATLDTTLLEQRLNCTSLTST
GRSFPVRAHYANKTLKTVEVIDEVARLTLAAYQAESGNILVFLPGQKEIRQLHQQLQAQL
SEQPHLTIMPLYGDLSLEQQEQVIKATVPPKRKIVLATAIAQTSLTIEGIGVVVDSGLSR
EARFDANTATTRLHTRRATQAETIQRMGRAGRTQAGVCYRWWSEEQQHRLAPQAQPQIEC
VDLSAVTLNLAQWGVQDRLELDWITPPPESHFQQSIDVLRHLNAIEATNLTLTPHGEQMS
KLNLEPRLAQILLLGKQWGETELACQACALLSEGDPFSQQDSDFSMRLEWLANKSPISTQ
KPKHFYLQSLRQWQNRSQNLKQTKQQIDLKQGVVLGTLLAGAYADRIAQRLPSQAKQNAQ
STRFKLANGRIATLDSRDSNAQADYLLVLDIGGHQGQQEDRIFLAQSLDISALSHALPHL
LKTRSHLAWSKSEARLISEQQTWIGKLCLHRKQSAQFDPQQITEAMLQHIRQTGLDTLPW
QDDSSQLIARIQFAASHDTQDWPDMADQGLLDRLAEWLGPYLTNITTQNALNKLPLKQIL
LDSLSWEQQRRLNEYIPDRLAVASGNQHKIDYRQQPPKLSVKLQEVFGMTQTPSVLGQNL
TLELLSPNQRPLAVTHDLPFFWREAYPEVKKEMRGRYPKHPWPDDPLAAQATAKTNRALR
ASQ
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgacatcctctttgcctattcatgccattctgcccgacttgcttcaaaccttattggag
caagatcaagcgatcttagaagcggcacccggtgcgggtaaaaccagtgtggtgccattg
gctttgatggatcaggcctggaatcaaggacgcaagatagtcatgttggaaccccgtcgt
ttagctgccaaagcggccgcgaagcgattggctgatacgttaaaagagccggtaggaaaa
cacataggttatcgtattcgtcacgacaccaaagaaagcaaagagacgcaagtcttggtg
gtcaccgaaggcgtcctaactcgcatgttgcaagatgatccttcactgagtgatatatca
cttgttattttcgatgaatttcatgagcgcaacctccactctgatctggcctttgcctta
tgtttacaggcacgagaactgtatcgcgatgaagatcctttgaaactactggtcatgtcc
gcgaccctcgatacgaccttattagaacaacgtctcaactgcaccagtctcaccagtact
ggtcgtagctttcctgtcagagcgcattacgccaacaaaacgctgaaaaccgtcgaggtt
attgatgaagtggcccgtttaactttggccgcctatcaagcagaaagtggtaacattctg
gtcttcttaccgggtcaaaaagaaattagacaactccatcaacagcttcaggcacagctg
agtgagcaaccacatttaaccattatgcccttgtatggagaccttagcttggaacaacaa
gagcaggtcatcaaggcaaccgtaccccctaaacgtaaaatagtattggcgacggccatt
gcgcaaacgagcttaaccattgaaggaattggggtggtggttgacagtggcctgagccgt
gaagccagatttgatgccaataccgctaccacgcgcttgcatactcgtcgcgcgacacaa
gccgaaacgattcagcgcatgggacgagcaggtcgtactcaggcgggggtttgctaccgt
tggtggagtgaagaacagcagcatcgcttagcgccacaagcccaacctcagatagaatgc
gtcgacctaagtgctgtgacacttaatctggctcaatggggtgtacaagatcgcttagag
cttgattggatcacacctccacccgaaagccactttcaacaatccattgatgtattacgt
catttaaatgccatcgaagcgactaacctgacattgacgcctcatggtgaacaaatgagt
aaattgaatttagagccaaggctggcgcaaattctcttgttaggcaaacaatggggagaa
accgagctggcctgccaagcctgtgccctattgtcagaaggcgatccgttctctcagcag
gatagtgacttttcaatgcgcttagaatggctggccaataaaagcccgatatcgactcaa
aaaccaaaacatttttatctgcaatctctaaggcaatggcaaaatcgcagccaaaatctc
aagcaaacaaaacaacaaattgatcttaaacaaggtgtcgtactgggcacattactagca
ggcgcttatgctgatcgtatcgctcaacgccttccctcacaggctaaacaaaacgctcaa
agcacgcgttttaaattagccaatggccgtattgccacactggacagtcgcgactcaaat
gctcaagcggactaccttctggtcttagatattggtggtcatcaaggtcaacaagaagac
cgtatttttcttgcccaatcattggatatctccgccttatcacatgccttgccgcaccta
ctgaaaactcgttctcatctggcgtggtcaaaatcggaagcgcgccttatcagtgaacag
caaacctggattggtaagctctgtttacatcgcaagcagtctgctcaattcgatcctcaa
caaatcaccgaggcaatgctacaacacattcgccagacggggctcgatacgctaccttgg
caagacgatagctcacaattgatagcacgcattcaatttgccgccagtcatgacactcag
gattggccagacatggcggatcagggcttactcgatagactagcggaatggttaggcccc
tatttgaccaacatcacaacgcaaaatgccttaaataaactgccccttaagcaaatcctg
ctggacagtttgtcatgggaacaacagcgcagattgaatgaatacataccggatcgctta
gctgttgcttcaggcaatcagcataagatagattaccgccagcaaccgcctaaactcagt
gtcaaactacaagaagtgtttggcatgacacaaacacccagtgttctaggacaaaattta
accctagaattgctgtcccctaatcaacgtccattggccgtcacccatgacctgcctttc
ttttggcgagaggcttacccagaagtaaaaaaggaaatgcgcggtcgttacccaaaacac
ccttggcctgacgatcctttagcggcacaagccaccgcaaagaccaaccgagccttacga
gcttctcaataa
DBGET
integrated database retrieval system
