Marinomonas posidonica: Mar181_3331
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Entry
Mar181_3331 CDS
T01508
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mpc
Marinomonas posidonica
Pathway
mpc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mpc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Mar181_3331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpc03021
]
Mar181_3331
03400 DNA repair and recombination proteins [BR:
mpc03400
]
Mar181_3331
Enzymes [BR:
mpc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Mar181_3331
Transcription machinery [BR:
mpc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Mar181_3331
DNA repair and recombination proteins [BR:
mpc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Mar181_3331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AEF56349
UniProt:
F6CTY0
LinkDB
All DBs
Position
complement(3670348..3671352)
Genome browser
AA seq
334 aa
AA seq
DB search
MQRSVSELLTPRNIEVQELGKTRAKVTLQPLERGFGHTLGNALRRILLSSMPGCAIVEVE
IDGVLHEYSAIEGVKEDVIEILLNLKGVAIALHGQDEATLTLSKKGPGVVTAGDIQLVAD
AEIANPDHVIAHLDDTAELTMQIKVARGRGYEPADARVAGDDETRPIGRLQLDASFSPVR
RVAYSVDNARVEQRTDLDKLVLDIESNGTIDPEEAIRRAATILQQQIAVFVALESESEAP
VEEEEDEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLAQRGLSLGMRLENWPPASLKDDSKVLAR
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgttcagtgagcgagttgttaaccccacgcaacattgaagttcaggaattaggc
aaaacgcgcgctaaagttacgctacaaccgctagaacgtggttttggtcatactttgggt
aatgcgttgcgtcgtattcttttatcttctatgccaggttgtgcgattgttgaagtcgaa
atcgacggtgtattacacgaatacagcgcaatcgaaggggttaaagaagatgtaattgaa
attcttcttaacctgaaaggagttgcgatcgctctacacgggcaagatgaagcaactctt
actctaagtaaaaaaggtcctggtgtcgtaacggctggggacatccagttagttgctgat
gcagagatcgctaatccggatcatgttattgcgcacttagacgatactgcagagttaact
atgcagatcaaagtcgctcgtggccgtggttatgagcctgctgatgctcgtgttgctggc
gacgatgagactcgtccaattggtcgcttgcaactggatgcctcattcagccctgttcgt
cgtgtggcttacagtgtcgataatgctcgtgtagagcaacgtacagacttggataaattg
gtgctagacatcgaatccaacggtacgatcgatcctgaagaagcgattcgtcgtgcagcg
acgattcttcaacaacaaattgcggtcttcgttgcgcttgaaagtgaaagcgaagcacca
gttgaagaagaagaggatgagattgatccaattttgctacgcccggttgatgatcttgaa
ttgaccgttcgcagtgctaactgtttaaaagcagagaacatttattacatcggtgatttg
attcaacgtactgaggttgagcttcttaagacgcctaacctaggtaagaagtcgttaact
gaaatcaaagatgttttagcacagcgtggtttgtctttgggaatgcgtctagaaaactgg
ccaccagctagtttgaaagacgatagcaaagttctagctcgctag
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