Marinomonas posidonica: Mar181_3516
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Entry
Mar181_3516 CDS
T01508
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mpc
Marinomonas posidonica
Pathway
mpc03420
Nucleotide excision repair
mpc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mpc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Mar181_3516
03430 Mismatch repair
Mar181_3516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpc03400
]
Mar181_3516
Enzymes [BR:
mpc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Mar181_3516
DNA repair and recombination proteins [BR:
mpc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Mar181_3516
MMR (mismatch excision repair)
Other MMR factors
Mar181_3516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AEF56532
UniProt:
F6CVQ8
LinkDB
All DBs
Position
complement(3870783..3872996)
Genome browser
AA seq
737 aa
AA seq
DB search
MDVSFILDSLNDKQREAVAAPLQNSLVLAGAGSGKTRVLVHRIAWLMHAYELSPYSLMAV
TFTNKAAREMQGRIEELVGVPPQGMWVGTFHGLAHRLLRAHWRDAGLKENFQIMDSDDQL
RLIKRIMRELSIDDTRWPPKQVAWFINGQKDEGRRAAHVPDSHDPFTKGMRELYYHYEEA
CERGGLLDFGELLLRAHELMLSTPALLRHYQERFRHVLVDEFQDTNTIQYAWLRVMVGDQ
GTITAVGDDDQSIYGWRGAKIENIHNFSKHFDDVQTIRLEQNYRSTGHILNAANGLIQHN
DDRLGKELWTDSGEGEPISVYAGFNEQDEARFILGIIKEWRDKGTSLTDMAILYRSNAQS
RVIEECLVREQIAYRIYGGHRFYDRLEIKNALAYARLALDPNDDGAMERVVNVPPRGIGE
RSIGTLREIARDQGCSMWQAAQEVVRQSLMPARATNAIKTFLHLIEGLSTTVQQPDLNLN
DIFEQIIEEAGLIPFHEKEKGEKGEARIENLKELVGAAGGFSWNDEDEEFSSPLMAFLDQ
AVLDAGDQQADEYQDAVQLMTLHSAKGLEFPLVFLTGVEENVFPSKMSFEEPGRLEEERR
LCYVGVTRAMEKLYITYAESRRLFGSESFNSPSRFIKEIPPECLQEVRLRSQVSRPVSLQ
RPDYQSEKEKLQNSSVLNRYQAPEVNVSMGDRVKHPVFGEGLVVNYEGQGPQARVQVNFD
GEGSKWLVLSFAKLEVM
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttttatcctggattcattgaatgacaagcaacgcgaagccgttgcggca
ccattgcaaaatagcttggtgttagctggggctggatcaggaaaaactcgagtattagta
catcgcatcgcttggctgatgcacgcttatgaactttctccatacagtttaatggcggtg
acctttaccaataaagcggctcgtgaaatgcaagggcggattgaagagctggtaggggta
ccaccgcaaggcatgtgggtgggaacctttcacggactagcacaccgtttgttacgggct
cattggcgtgatgcgggcttgaaagaaaactttcagatcatggacagcgatgatcaactg
cggttgattaagcgaatcatgcgagaattaagcattgatgatactcgttggccacccaaa
caagtggcgtggtttattaacggacaaaaagacgagggtcgtcgtgccgctcatgtgcca
gacagtcatgaccctttcacaaagggcatgcgcgaactctattatcattatgaagaagct
tgtgaacgaggcggattattggattttggtgagttgctgttgcgtgctcacgaattgatg
ctcagtacgccagcgctattgcgtcattatcaagagcgattccgtcatgtgctggtggac
gaatttcaagacaccaataccattcaatatgcttggttacgcgtcatggttggcgatcaa
ggtacgatcaccgctgttggggatgacgatcagtctatctatggctggcgaggcgcgaag
atcgaaaatatccataactttagtaaacactttgatgatgttcagaccattcgtttggag
caaaactaccgttccactggtcatatcctgaacgcggccaatggtctgattcaacacaat
gatgatcgattaggcaaagagctgtggaccgacagcggtgaaggagagccaatttctgtc
tacgctggttttaatgagcaagatgaggcgcgcttcattttgggcatcattaaagaatgg
cgagataaagggacatcgctcacggacatggcgattctatatcgttccaatgctcaatct
cgtgtgattgaagaatgccttgtaagggaacagattgcttatcgtatttatggtgggcac
agattctacgaccgtctagaaattaaaaatgccttggcctatgctcgtttagcgctggat
ccgaatgacgatggtgccatggaacgagtggtgaatgtcccccctcgtggtattggtgaa
cgcagtattggtaccttaagagaaatcgctcgtgaccaaggttgttctatgtggcaagcc
gcgcaagaagtggtgcgacagtctctgatgccagcccgagcgaccaatgccatcaaaacc
ttcctgcatctgattgaaggtttaagcacgaccgtccagcagccagatttgaatctcaat
gatattttcgaacagattatagaggaagcgggtctcatccctttccacgaaaaggaaaag
ggtgaaaaaggcgaagcgcgcattgaaaacttaaaagaactggtgggagccgctggtggt
tttagttggaatgacgaagacgaagagtttagctcgcctctgatggcctttttagatcaa
gcggtattggatgcaggtgatcagcaggcggacgaatatcaagatgcggtgcagctaatg
actttgcactcggcaaaaggtttggagtttcctttggtattcttaacgggtgtagaagaa
aacgtcttcccaagtaagatgtcatttgaagagcctggtcgtttagaagaagaacgtcgc
ttgtgctacgttggtgttacccgagcgatggaaaagctttacattacttatgctgaatct
cgtcgcttgttcggcagtgaatcctttaacagtccttctcgtttcattaaggaaatacct
ccggaatgtttgcaagaagtgcgtttacgatctcaggtcagtcgcccagtttccttacag
cgtcctgattaccaatcagagaaagagaagctgcaaaacagtagcgtattaaaccgttat
caagcaccagaagtgaatgtcagcatgggcgatcgtgtaaaacatccggtatttggtgaa
ggtttagtggtgaactacgaaggtcaaggaccacaagctcgtgtacaggttaactttgat
ggcgaaggcagtaagtggttggtattgtctttcgccaaattggaagtaatgtaa
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integrated database retrieval system
