Methanocella paludicola: MCP_0130
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Entry
MCP_0130 CDS
T01142
Symbol
tbp-1
Name
(GenBank) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
mpd
Methanocella paludicola
Pathway
mpd03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mpd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MCP_0130 (tbp-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mpd03000
]
MCP_0130 (tbp-1)
03021 Transcription machinery [BR:
mpd03021
]
MCP_0130 (tbp-1)
Transcription factors [BR:
mpd03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
MCP_0130 (tbp-1)
Transcription machinery [BR:
mpd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
MCP_0130 (tbp-1)
RNA polymerase III system
TFIIIB
MCP_0130 (tbp-1)
RNA polymerase I system
SL1/TIF-1B
MCP_0130 (tbp-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
T4bSS_IcmS
Motif
Other DBs
NCBI-ProteinID:
BAI60202
UniProt:
D1YUT0
LinkDB
All DBs
Position
complement(125232..125798)
Genome browser
AA seq
188 aa
AA seq
DB search
MSKAEEAKKTITIENVVASTAIGQEIDLKSVTLALEGADYDPEQFPGLVYRTKDPKTAAL
IFRSGKIVCTGAKSIEDVDRGLKKVFKKMDSVGIKVDQNPEITVQNIVASADLGSVLNLN
AIAIGLGLENIEYEPEQFPGLVYRLDHPKVVVLLFGSGKLVVTGGKKPKDAEEAVDRIVK
ELEGLALL
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagccgaagaagccaagaagacgatcacaatcgagaacgtcgtggcatccacc
gccatcggccaggagatagacctcaagtcggtcaccctcgccctcgaaggcgccgactac
gacccggagcagttcccgggcctcgtataccgcaccaaggaccccaagaccgccgcgctc
attttccggagcggcaagatcgtgtgcacgggcgccaagagcatcgaggacgtggaccgc
gggctcaagaaggtcttcaaaaagatggacagcgtgggcatcaaggtcgaccagaacccc
gagatcaccgtccagaacatcgtcgcatcggcggacctgggctccgtccttaacctgaac
gccatcgccatcggcctcggcctcgagaacatcgagtacgagcccgagcagttccccggc
ctcgtgtaccggctggaccaccccaaggtcgtcgtgctcctgttcggttccggcaagctc
gtcgtcaccggcggcaagaagcccaaggacgccgaagaggcagtcgaccgcattgtcaag
gaactcgagggcctcgccttactgtga
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integrated database retrieval system
