Methanocella paludicola: MCP_0858
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Entry
MCP_0858 CDS
T01142
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
mpd
Methanocella paludicola
Pathway
mpd00300
Lysine biosynthesis
mpd00470
D-Amino acid metabolism
mpd01100
Metabolic pathways
mpd01110
Biosynthesis of secondary metabolites
mpd01120
Microbial metabolism in diverse environments
mpd01230
Biosynthesis of amino acids
Module
mpd_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mpd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
MCP_0858 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MCP_0858 (dapF)
Enzymes [BR:
mpd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
MCP_0858 (dapF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
BAI60930
UniProt:
D1YWV8
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All DBs
Position
complement(850918..851757)
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AA seq
279 aa
AA seq
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MTIQFTKLQGNGNDFILIDEWDDLLVPDDRKAAFAKKYCHRRFGIGADGVLFLTKGVKAP
LQMRIFNEDGSEAEMCGNGIRCFAKYALDKRYIVPGLARVETKAGVLEIETKTENGKTYI
KVNMGKPLFDRVKIPAQGHGEFINVPLHGYEVSAVNTGVPHAVVFVDSLEDPDLMDAAPL
IRFDKVFAKGANVNFVQRDMGNLRVRTYERGVEGETLSCGTGSVAAAAIARHLGIVRDSA
VVKTAGGELRITFEHDMAYMEGGAETVYKGEIEFDLSTP
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgaccatacagttcaccaagctccagggaaacggcaacgatttcatcctcatcgacgag
tgggacgacctcctcgtgcccgacgacaggaaggccgccttcgcgaagaagtactgccat
aggcgcttcggcatcggcgccgacggcgtcctctttttgaccaagggcgtcaaagccccg
ctgcaaatgcgcatcttcaacgaggacggctccgaggcggagatgtgcggcaacggcatc
cgctgcttcgctaagtatgcgctcgataagcgctacatcgtgcccggcctggcaagggtt
gagacaaaggcgggcgtgctggagatcgagacgaagacggagaacggcaagacatacatc
aaggtaaacatgggcaagcccctcttcgaccgcgtcaagatccctgcccagggccacggc
gaattcattaatgttccgctgcacggctacgaggtgtccgcggtcaacaccggcgtgcct
catgccgtcgtcttcgtggattccctcgaggacccggacctcatggatgcggcgcccctg
atacgtttcgacaaggtcttcgcaaagggggcgaacgtgaacttcgtccagagggacatg
ggcaacctccgcgtccggacgtacgagcgcggtgtcgagggcgagaccttaagctgcggc
acgggctccgttgctgccgctgcaatagccaggcatctcggcatcgtccgggactccgca
gtcgttaaaactgctggtggtgaactccgtatcacctttgaacatgacatggcgtacatg
gaaggcggcgccgagacggtttacaagggtgagatagagttcgacctctcaacaccctaa
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