KEGG   Methanocella paludicola: MCP_0858
Entry
MCP_0858          CDS       T01142                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
mpd  Methanocella paludicola
Pathway
mpd00300  Lysine biosynthesis
mpd00470  D-Amino acid metabolism
mpd01100  Metabolic pathways
mpd01110  Biosynthesis of secondary metabolites
mpd01120  Microbial metabolism in diverse environments
mpd01230  Biosynthesis of amino acids
Module
mpd_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:mpd00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    MCP_0858 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    MCP_0858 (dapF)
Enzymes [BR:mpd01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     MCP_0858 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF Pro_racemase
Other DBs
NCBI-ProteinID: BAI60930
UniProt: D1YWV8
LinkDB
Position
complement(850918..851757)
AA seq 279 aa
MTIQFTKLQGNGNDFILIDEWDDLLVPDDRKAAFAKKYCHRRFGIGADGVLFLTKGVKAP
LQMRIFNEDGSEAEMCGNGIRCFAKYALDKRYIVPGLARVETKAGVLEIETKTENGKTYI
KVNMGKPLFDRVKIPAQGHGEFINVPLHGYEVSAVNTGVPHAVVFVDSLEDPDLMDAAPL
IRFDKVFAKGANVNFVQRDMGNLRVRTYERGVEGETLSCGTGSVAAAAIARHLGIVRDSA
VVKTAGGELRITFEHDMAYMEGGAETVYKGEIEFDLSTP
NT seq 840 nt   +upstreamnt  +downstreamnt
atgaccatacagttcaccaagctccagggaaacggcaacgatttcatcctcatcgacgag
tgggacgacctcctcgtgcccgacgacaggaaggccgccttcgcgaagaagtactgccat
aggcgcttcggcatcggcgccgacggcgtcctctttttgaccaagggcgtcaaagccccg
ctgcaaatgcgcatcttcaacgaggacggctccgaggcggagatgtgcggcaacggcatc
cgctgcttcgctaagtatgcgctcgataagcgctacatcgtgcccggcctggcaagggtt
gagacaaaggcgggcgtgctggagatcgagacgaagacggagaacggcaagacatacatc
aaggtaaacatgggcaagcccctcttcgaccgcgtcaagatccctgcccagggccacggc
gaattcattaatgttccgctgcacggctacgaggtgtccgcggtcaacaccggcgtgcct
catgccgtcgtcttcgtggattccctcgaggacccggacctcatggatgcggcgcccctg
atacgtttcgacaaggtcttcgcaaagggggcgaacgtgaacttcgtccagagggacatg
ggcaacctccgcgtccggacgtacgagcgcggtgtcgagggcgagaccttaagctgcggc
acgggctccgttgctgccgctgcaatagccaggcatctcggcatcgtccgggactccgca
gtcgttaaaactgctggtggtgaactccgtatcacctttgaacatgacatggcgtacatg
gaaggcggcgccgagacggtttacaagggtgagatagagttcgacctctcaacaccctaa

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