Methanocella paludicola: MCP_1055
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Entry
MCP_1055 CDS
T01142
Name
(GenBank) putative TrmB family transcriptional regulator
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
mpd
Methanocella paludicola
Brite
KEGG Orthology (KO) [BR:
mpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mpd03000
]
MCP_1055
Transcription factors [BR:
mpd03000
]
Prokaryotic type
Helix-turn-helix
Other families
MCP_1055
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TrmB
TrmB_EBD_N
DUF7436
PLDc_2
HTH_IclR
HTH_29
HTH_28
DUF2250
HTH_24
MarR_2
HTH_5
GntR
Rrf2
WHD_RecQ_mid_bact
Penicillinase_R
MarR
HVO_A0261_N
HTH_20
HTH_Cmi2_C
PadR
HTH_Crp_2
DUF5817_CT
Motif
Other DBs
NCBI-ProteinID:
BAI61127
UniProt:
D1YXF5
LinkDB
All DBs
Position
complement(1055544..1056323)
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AA seq
259 aa
AA seq
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MLLDEKVLSTLQRMGLTYYGSKAYAALVAMGPSSPGDIAKEADIPRSKIYEVLKRLEEEG
WASVERGRPLKYKPRRPKESIEERKALLFSDVEYASAELSSIYERHIDKESPKVWLIRGM
DNISERISDMMARAKHDIVLLGALYSEGEIDRIKKQMERARKRGVTIRIITRPSIELKDR
DIDLVEALSGVVPEIRLYKTPFIKFVVIDGREILIMFSKVTDDVPDVENAIAIWTPNQEV
ASLMQSNFNMMWDVAEPAK
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgcttctcgatgagaaagtgctctctactcttcagcgtatgggtttgacatattatggc
tctaaggcttatgccgcgctcgtcgccatgggcccgtcgtcgccaggcgatatcgcgaaa
gaggcggacatacccaggtcgaagatctatgaggtgctgaagaggctggaagaggaaggc
tgggcgagcgtggaaagagggcggcccttaaagtataagccacggcggccgaaggagtcc
atcgaggagcgcaaggcgctacttttttcggacgtggaatacgcctccgccgagctttcg
tctatctatgagaggcatatcgataaagagtccccaaaggtctggctcatccggggcatg
gacaacatttctgagcgcatctcggacatgatggccagggcaaagcacgatatcgtgctg
ctgggcgcattgtattccgagggcgagatcgaccgcatcaagaagcagatggaacgggca
cgcaagaggggagtcaccatccgtatcattacccggcccagcatcgagcttaaagacaga
gacattgaccttgttgaagcgctttccggcgtggtgcccgagatcaggctctacaagacg
ccgttcatcaagttcgtggtcatcgatgggcgggagatattgatcatgttctcgaaggtg
accgacgacgtgcccgacgtggagaatgccatcgccatatggacgccgaaccaggaagtc
gcctcactcatgcagagtaatttcaacatgatgtgggatgtggctgagccggcaaaataa
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