Methanocella paludicola: MCP_1219
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Entry
MCP_1219 CDS
T01142
Symbol
rpoA2
Name
(GenBank) DNA-directed RNA polymerase subunit A''
KO
K03042
DNA-directed RNA polymerase subunit A" [EC:
2.7.7.6
]
Organism
mpd
Methanocella paludicola
Pathway
mpd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mpd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MCP_1219 (rpoA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpd03021
]
MCP_1219 (rpoA2)
Enzymes [BR:
mpd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MCP_1219 (rpoA2)
Transcription machinery [BR:
mpd03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MCP_1219 (rpoA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
DUF4777
PFam54_60
ATPgrasp_YheCD
jr-ZPR1
NAC
Motif
Other DBs
NCBI-ProteinID:
BAI61291
UniProt:
D1YXW9
LinkDB
All DBs
Position
1207656..1208825
Genome browser
AA seq
389 aa
AA seq
DB search
MSISESTIEAELNKIEGLPAKIVDELKASLKDVKISKKQLDEIIEKTREAYSHAKVENCE
AVGMVAAQSIGEPGTQMTMRTFHYAGVAEIDVTLGLPRLIEIVDARREPSTPMMTIHLSP
EISGNRDPVRKLAWELEETTVSDIGSIATNLNDMTIIIDLNEKQVLQRSMTIDEVMGKIG
EVTGLKIDVNDNRLTVHPEGESYRDLLQMVETIRTILLKGIKGISRVVIRKEENEYVIYT
QGSALKKVIHFDGVDASRTKTNNINEISEVLGIEAARNAIINEALDTLSEQGLTVDIRHI
MLVADMMSIDGEVKQIGRHGISGEKASVLSRAAFEVTVNHLLDAAVAGEVDELTGVTENV
IVGQPIQLGTGDVELITTSSSLKKTKSKA
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
gtgagcatatcagaatccaccatcgaggcagagctcaataagatcgagggcctgccggca
aagatcgtcgacgagctaaaggcgagcctgaaggacgtgaagatcagcaagaagcagctc
gacgagatcatcgagaagacccgcgaggcgtactcgcacgcgaaagtggagaactgcgaa
gccgtcggcatggtcgccgcacagagtatcggcgagcccggcacgcagatgacgatgcgt
accttccactatgcgggcgtagccgagatcgacgttacgctcggcctgcccaggcttatc
gagatcgtggacgccaggcgcgagccttccactcccatgatgaccattcacctgtccccc
gagatatcgggcaacagggaccccgtcaggaaacttgcgtgggagcttgaggagaccacg
gtcagcgacatcggctccatcgccacgaacttgaacgacatgaccatcatcatcgacctc
aacgaaaagcaggtcctgcagaggagcatgaccatcgacgaggtcatgggcaagatcggg
gaagtcaccgggctcaagatcgacgtgaacgacaaccgtctcaccgtccatcccgagggc
gagtcctatcgtgatctgctccagatggtagaaacgatacgaacgatacttttaaaaggc
ataaaaggtattagtcgtgtcgtcatccgaaaagaagagaacgagtatgtaatatatact
cagggctccgcgctgaagaaggtcatacacttcgacggcgtcgacgcctccaggaccaag
acgaacaacatcaacgagatctccgaggtcctgggcatcgaagcggcccgaaacgcgatc
atcaatgaagccctcgacacgctgtccgagcagggtctcacggtcgacatccggcacatc
atgctggtcgccgacatgatgagcatcgacggcgaggtcaagcagatcggcaggcacggc
atctcgggcgagaaggccagcgtcctgtcgagagcggctttcgaggtcacggtgaaccac
ctcctcgacgccgccgtcgcgggcgaagtcgatgagctgaccggcgtaactgaaaatgtt
attgtcgggcagccgatacagctaggcaccggggacgtagagcttataaccacatcctcg
agcctcaagaaaacaaagtctaaggcttag
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