Methanocella paludicola: MCP_1245
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Entry
MCP_1245 CDS
T01142
Name
(GenBank) putative TrmB family transcriptional regulator
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
mpd
Methanocella paludicola
Brite
KEGG Orthology (KO) [BR:
mpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mpd03000
]
MCP_1245
Transcription factors [BR:
mpd03000
]
Prokaryotic type
Helix-turn-helix
Other families
MCP_1245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmB
Regulator_TrmB
HTH_5
Fe_dep_repress
HTH_IclR
MarR_2
HTH_27
PadR
GntR
HTH_24
PLDc_2
DUF150_C
dTDP_sugar_isom
MarR
Redoxin
HTH_20
HTH_10
HTH_36
HTH_11
Motif
Other DBs
NCBI-ProteinID:
BAI61317
UniProt:
D1YXZ5
LinkDB
All DBs
Position
complement(1230273..1231118)
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AA seq
281 aa
AA seq
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MKNISPALVASLKTLGLFDSEAKVYSALVLYKYAEAKDLVEMLDISKPSIYESLRTLEER
GLVVETNSKPLVYQAIPPEIAVRLLADVYVKAAEEALRGLHALEKENRQEKSARALWSIY
GNATVGYKIDDMIDHAEQSIYCMASDRYVRHLERAAGKGVKVTLMVMSDDGTLEGRLKKT
FEKDDATIYVMSAKEMIDAFSAGEMGNTNKVTPFKEAMGVLDHRSAFMLITDDREFLYVP
PIAGDEISALNTTNQAFIMSSKFIFSPWSMKKAPDSKPRKK
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatatctcgcccgccctcgtggcatcgctcaaaacgctgggcctcttcgattcg
gaggccaaggtctattcggcgctcgtcctttacaagtacgccgaggcgaaggacctggtc
gaaatgctggatatcagcaagccgagcatctacgagagcctgcggacgctggaagagcgc
gggctggtcgtggagacgaatagcaagccgctggtctaccaggcgatcccgcccgagatc
gccgtccggctcctggcggacgtgtacgtgaaggcggcggaggaggcgctccgggggctg
cacgcgctggaaaaggagaaccggcaggagaagtccgcccgcgccctctggtcgatatat
ggcaacgcgaccgtcggctacaagatcgatgacatgatcgaccatgcggagcagagcatt
tattgcatggcatcggaccgctacgtgcgccatctggagcgggcggcgggcaaaggcgtt
aaggtcaccctcatggtcatgtcggacgacgggacgctcgaaggcaggctgaaaaaaacg
ttcgagaaggacgacgcgacgatctacgtcatgtcggcaaaggaaatgatcgatgccttt
tccgctggcgagatgggaaatacgaataaggtcacgccctttaaggaagcgatgggcgtc
ctggaccatcgcagcgcgttcatgctaataacggatgaccgcgaattcctgtacgtcccc
ccgatcgccggggacgagatcagcgccctgaacacgacgaaccaggcgttcatcatgagc
tcgaagttcatcttttccccgtggagcatgaaaaaagcaccggatagtaagccgcggaaa
aaataa
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