Methanocella paludicola: MCP_1285
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Entry
MCP_1285 CDS
T01142
Name
(GenBank) putative TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
mpd
Methanocella paludicola
Pathway
mpd03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mpd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MCP_1285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mpd03000
]
MCP_1285
03021 Transcription machinery [BR:
mpd03021
]
MCP_1285
Transcription factors [BR:
mpd03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
MCP_1285
Transcription machinery [BR:
mpd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
MCP_1285
RNA polymerase III system
TFIIIB
MCP_1285
RNA polymerase I system
SL1/TIF-1B
MCP_1285
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-ProteinID:
BAI61357
UniProt:
D1YY35
LinkDB
All DBs
Position
complement(1272946..1273239)
Genome browser
AA seq
97 aa
AA seq
DB search
MFSKMNSVGIEVKPKPQATVQNIVSSADLGCLLNLNSVCIAFGLENVEYEPEQFPGLVLR
LDPPKVAVLLFGSGKMVITGSKTPKTPKTPSPALSGN
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
gtgttcagtaaaatgaatagcgtcggtatcgaagtaaagccgaagccgcaggccaccgtg
cagaacattgtctcgtcggctgacctggggtgcctgctcaacctgaactccgtttgcatt
gccttcgggctcgagaacgtcgaatatgagcccgagcagttccccggcctcgtgctcagg
ctggacccgccaaaggtcgccgtgctgttattcggcagcggcaagatggtcatcacgggc
agcaagacgccgaagacgccgaagacgccgtcgcccgcattatcagggaattag
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