Methanocella paludicola: MCP_1408
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Entry
MCP_1408 CDS
T01142
Symbol
endA
Name
(GenBank) tRNA-splicing endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
mpd
Methanocella paludicola
Brite
KEGG Orthology (KO) [BR:
mpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mpd03016
]
MCP_1408 (endA)
Enzymes [BR:
mpd01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
MCP_1408 (endA)
Transfer RNA biogenesis [BR:
mpd03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
MCP_1408 (endA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
BAI61480
UniProt:
D1YYF8
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All DBs
Position
1407988..1409085
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AA seq
365 aa
AA seq
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MKGELKGDRVVMGSDAVEELYNVLYYGRLKDDTLELALVEAAYLLDREKISVDSNGRSLS
FRDLFIEASHLQEYFELKYIVYRDLRERGYYVQPGVTDFRVYPRGGKPGVTASHLFVHVV
TERKPLPLTQLISNLQAAINVRREMALAIVDEESDITYYGVKFQRMRGGMGPLDVEMKKG
VATLMADRVIVWDQGMSLQLHEKGFYGNMLDEKRLQLSLIESAYLMKKYGLAILDTQTNE
PLKLETFIQKTRTIDRDFEGKLKVYEDLRERGLVAKTGFKFGSHFRVYLKIENIKKIPHS
LYLVDYIENGHVFDLPDLSRSVRLANSVRKEMVFAFEKDGAASDKGGIASDSGGVQYFSL
GRIKL
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcgagctaaaaggcgaccgggtcgtcatgggcagtgatgccgtcgaggagttg
tataatgttctatattatggccgccttaaggatgatacgctcgagcttgctctggtcgag
gccgcctatcttctggaccgtgagaagatctctgtcgactctaatggtagatcgctgtcc
ttcagggaccttttcatcgaggcgtcgcatctgcaggaatacttcgagcttaagtatatc
gtttatcgtgatcttcgcgagcgcggctattatgttcagcccggcgttacggatttccgg
gtctacccgcggggcggcaagccgggcgtcacagcctctcacttatttgttcacgtagta
acggagcgcaagcccctcccgctaacgcagctcatatcgaacctgcaggcggccatcaat
gtccggcgggaaatggcgctagccatcgtggacgaagaaagcgacataacgtactacggc
gtcaagttccagcgtatgcggggtggtatgggtccactggacgttgaaatgaaaaagggc
gtggccacgctcatggccgaccgggtcatcgtctgggaccagggcatgtccctgcagctc
cacgaaaaaggcttctacggcaatatgctggacgagaagcgcctccagctatccctcatc
gaatccgcctatctgatgaaaaaatatggcctggcgatcctagacacacagacaaatgag
cccctgaagctcgaaacctttatacaaaaaacgcgcacaatagaccgtgacttcgaaggc
aaattgaaagtctacgaggacttaagggagaggggcctggtcgcgaagaccgggttcaag
ttcggcagccatttccgcgtatatctcaagatcgagaacatcaagaagatcccgcactcc
ctctacctggtagactatattgagaacgggcacgtgttcgacctgcccgacctgtcgagg
tcggtaaggctggcgaacagcgtccggaaggaaatggtcttcgccttcgagaaagatggc
gcagcctccgataagggaggcatagcctccgatagcgggggcgtacagtacttcagcctt
ggccgcattaagctatag
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