Methanocella paludicola: MCP_1871
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Entry
MCP_1871 CDS
T01142
Symbol
tbp-2
Name
(GenBank) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
mpd
Methanocella paludicola
Pathway
mpd03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mpd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MCP_1871 (tbp-2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mpd03000
]
MCP_1871 (tbp-2)
03021 Transcription machinery [BR:
mpd03021
]
MCP_1871 (tbp-2)
Transcription factors [BR:
mpd03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
MCP_1871 (tbp-2)
Transcription machinery [BR:
mpd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
MCP_1871 (tbp-2)
RNA polymerase III system
TFIIIB
MCP_1871 (tbp-2)
RNA polymerase I system
SL1/TIF-1B
MCP_1871 (tbp-2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF7018
Motif
Other DBs
NCBI-ProteinID:
BAI61943
UniProt:
D1YZS1
LinkDB
All DBs
Position
complement(1875768..1876334)
Genome browser
AA seq
188 aa
AA seq
DB search
MSKAEEAKKTIRIENVVASTAIGHEIDDLTRVSLDMGGDYDPEQFPGSVYRTKDPRTASL
IFRSGKIVCTGAKKVEDVGKGLDKVFKKMSSVGIKVMPNPEIVVQNIVSSVDLGSVLNLN
AIAIGLGLENIEYEPEQFPGLVYRLDSPKVVVLLFGSGKLVVTGGKKPEDAEAAVDHIVK
ELEGLALI
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagctgaagaagcgaaaaaaacgataaggatcgagaacgtcgtggcatccact
gctatcggacatgagatagatgatctgacacgtgtgtctctcgatatgggtggggactat
gacccggaacagttcccgggatcagtatacaggacaaaagaccccaggacggcgtctctc
atcttcagaagcggcaagatcgtctgcacgggcgccaagaaagtcgaggatgtgggcaaa
ggcctggataaggtattcaaaaaaatgagcagcgtcggcatcaaggtaatgccaaatccg
gagatcgtcgtgcagaacatcgtctcatcggtagacctgggctcggtgcttaacctgaac
gccatcgccatcggcctcggcctcgagaacatcgagtacgagcccgagcagttcccgggc
ttagtttataggctggacagcccaaaggtcgtagttttgttattcggcagcggcaagctc
gtcgtcaccggcggcaagaagcccgaggacgccgaagcggccgtcgaccatatcgtcaag
gagctcgagggcctcgccttaatataa
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