Methanocella paludicola: MCP_2302
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Entry
MCP_2302 CDS
T01142
Symbol
ruvB
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
mpd
Methanocella paludicola
Pathway
mpd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mpd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MCP_2302 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpd03400
]
MCP_2302 (ruvB)
Enzymes [BR:
mpd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MCP_2302 (ruvB)
DNA repair and recombination proteins [BR:
mpd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MCP_2302 (ruvB)
RecFOR pathway proteins
MCP_2302 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
AAA_16
AAA_14
nSTAND3
DUF815
Mg_chelatase
RNA_helicase
AAA_3
Rad17
NTPase_1
AAA_22
TsaE
Sigma54_activ_2
AAA_33
AAA_18
NB-ARC
AAA_25
AAA_24
Parvo_NS1
NACHT
Bac_DnaA
AAA_17
ABC_tran
AAA_28
NPHP3_N
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
BAI62374
UniProt:
D1Z102
LinkDB
All DBs
Position
2259214..2260248
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AA seq
344 aa
AA seq
DB search
MINVSENEKEERADRIVTAEETEEERAGSFEGLRPKSLDEFIGQRKIKENLKVFIEAARK
RNEPLDHVLLYGPPGLGKTTLAHIIAREMGANIRITSGPAIERPGDLAAILTNIKEGDVI
FIDEIHRLSHVVEEVMYPAMEDYEIDIIIGKGPSARSIRLELPKFTLVGATTRAGLLTSP
LRDRFGMSMRFDFYEPRDLKTIIDRSASILGVELSEDGSMEIAKRSRGTPRIANRLLRRV
RDFASVGNKKVIDREIVNDSLNRLDVDYLGLDGMDRRILKKIVKDFDGGPVGAETLAVTV
SEEVETIEDVYEPYLIQIGFINRTPRGRMSTKAAVEHLQRMKEI
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgataaacgtatctgaaaacgaaaaagaagaaagggcagacaggatagtgacggcggag
gagaccgaggaagagcgtgcgggctccttcgagggactgcgcccgaagtcgctggacgag
ttcatcgggcagcggaagatcaaggaaaaccttaaagtgttcatcgaggccgcccggaag
aggaacgagcctctggaccacgtattgttatacggccctccaggcctgggcaagacgacg
ctggcgcacatcatcgcccgcgagatgggagcgaacatccgtatcacgtcgggccccgcg
atcgagcgccccggggacctggccgccatcctgaccaacatcaaggaaggcgacgtcatc
tttatcgatgaaattcaccgcctgagccacgtggtcgaggaggtcatgtacccggccatg
gaggactacgagatcgacatcatcataggcaagggccccagcgcccgctccataaggctg
gagctgccaaaatttaccctggtgggggctacgacccgggcgggcctgctgacttccccg
ctaagggaccgtttcggcatgtccatgcggttcgacttttatgagccacgggacctgaag
accatcatcgaccgctccgcgagtatcctgggcgtggaattgagtgaggacggctcgatg
gagatcgcgaagcgctcccgcgggacaccgcgtatcgcgaaccgtctcctgcgcagagta
agggactttgcttctgtcggtaacaagaaggtcatcgacagggagatcgtcaacgactcg
ctgaaccgccttgacgtggactacttagggctggacggcatggaccggcgcatcctgaag
aagatcgtgaaggacttcgacggggggccggtaggcgctgagacgctcgccgtcacggtg
agcgaagaggtggagaccatcgaggacgtctacgagccctacctgatccagatcgggttc
atcaaccgaactccccggggccgcatgtcgacgaaggcggccgtggagcacctgcaaagg
atgaaagaaatatga
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