Methanocella paludicola: MCP_2380
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Entry
MCP_2380 CDS
T01142
Name
(GenBank) putative glycoside hydrolase
KO
K07405
alpha-amylase [EC:
3.2.1.1
]
Organism
mpd
Methanocella paludicola
Pathway
mpd00500
Starch and sucrose metabolism
mpd01100
Metabolic pathways
mpd01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
mpd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
MCP_2380
Enzymes [BR:
mpd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
MCP_2380
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_57
DUF5752
Nif11
Motif
Other DBs
NCBI-ProteinID:
BAI62452
UniProt:
D1Z180
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All DBs
Position
2331461..2332909
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AA seq
482 aa
AA seq
DB search
MSRLCIGFEVHQPFRLNPDFSSSNGTDSLESAYFSPLNREILERVADKCYIPATSAILEN
LDKGFKCAFSISGTLAEQLEKWRPDALDLFRQAAAHKNAEMIAQTYFHSVASLFDLGEFE
EQVRLHKKMLKSTFGATPKVMENTEFIFNDHIARSAKKLGFKAIYTEGVERVLGWRSPDY
VYSCNGIKLLMRNYQLSDDVAFRFNNREWDQYPLMADKFASWAAASPGDYVNVFVDYETF
GEHHWSDSGILEFLRWLPKECMDRGIEFITPSQAAEIPARDELSVEETISWADVEKDASA
WLGNTIQHTALKAIQRARAYAKDKKMWRYLQTSDHFYYMASKFGSCADVHNYFSPDACKP
YDSFANYMRIVSDYERLAAQKMKKKAAAMELRTVPPEEAFQFYTSSAYTGFTAYSLDDLC
DLLNYVPKDSVEHHLRNKDLSRWVQDVLGDEALAGQMDACKNRLELAEVAAKKRDALWKS
LR
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgagcagattatgcataggatttgaagtccaccagcccttccggctcaacccggatttt
agcagcagcaatggtaccgatagcctggaaagcgcatatttcagcccgctgaaccgggag
atactggagagagtggcggataagtgctatatcccggccacgagcgccatcctcgagaac
ctcgataaggggttcaagtgcgccttcagcatatcggggacgctggccgagcagctcgag
aagtggaggcccgacgcgctggacctcttcaggcaggcggcggcgcataaaaatgccgag
atgatcgcccagacatatttccatagcgtcgcaagccttttcgacctgggcgagttcgag
gagcaggtcaggctccataagaagatgctaaagtcgacgttcggcgccacgccgaaggtc
atggagaacaccgagttcatatttaacgatcacatcgcccggtcggcgaaaaagctgggc
ttcaaggccatctatactgagggcgtggagcgtgtcctggggtggcggagcccggactac
gtgtactcgtgcaacgggatcaagctcctcatgcggaactaccagctatccgacgacgtg
gcgttccgttttaataatagggagtgggaccagtacccgcttatggccgataagttcgcc
tcctgggctgcggcgtcgcccggcgattatgtcaacgtcttcgtggactacgagaccttc
ggcgagcaccactggtcggactcgggcatcttagaattcttacgctggctgccgaaggag
tgcatggaccggggcatcgagttcatcacgccctcgcaggctgcggagataccggccagg
gacgagctgagcgtagaggagaccatctcctgggcggacgtggagaaggacgcctctgcc
tggctgggcaacaccatccagcacacggccctcaaggccatccagagggcccgcgcctac
gcgaaggacaagaaaatgtggcgctacctgcagacgagcgatcatttctactacatggcc
tcgaagttcggctcctgtgccgacgtgcacaactacttcagcccggatgcctgcaagccc
tacgattctttcgccaactacatgcggatcgtgtccgactacgagcgccttgcggcgcaa
aagatgaaaaagaaggctgctgcgatggagctgcggaccgtgccgccggaggaggcgttc
cagttttacacgtcgagcgcttacactgggttcacggcctatagcctggacgacctgtgt
gacctgctgaattacgtgcctaaagactccgtggagcaccacctgaggaataaggaccta
tcgaggtgggtgcaggatgtgctgggagacgaggctctggccggccagatggatgcctgt
aagaacaggctggagctggccgaagtcgccgcgaagaagagggatgcgctgtggaaaagc
ttaagatag
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