Methanocella paludicola: MCP_2478
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Entry
MCP_2478 CDS
T01142
Name
(GenBank) putative DNA mismatch repair protein
KO
K03555
DNA mismatch repair protein MutS
Organism
mpd
Methanocella paludicola
Pathway
mpd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mpd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
MCP_2478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpd03400
]
MCP_2478
DNA repair and recombination proteins [BR:
mpd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
MCP_2478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
AAA_14
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BAI62550
UniProt:
D1Z1H8
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Position
2436775..2438331
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AA seq
518 aa
AA seq
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MTFHSILSERADIAIEKPGMPSFFVDLNLDQVIDAITSGKQDYDLKPFFYSALADIGSIV
YRQEIFEDLENLDLLNSVDTFADNMCTMRDHLAQAKKLSYRYQKESWFLDAVIVYCHAVK
ELTRELSRIDLRSRGFCSFRDFLTVYSRSDRFTSLLEEAKQIMAELSTIKYSMIIKDGTI
KVRNYESESDYSADVEQTFEKFKQGAVKDYRSNLPEYVEMNHVEAKVLEFIGLLNPETFT
RLNDYYAKNQDYLDKTISGFDREVQFYISYIDHIGKFSDIGLQFCYPQISNPGKDVYSHE
GFDLALANRLIDKKSPIICNDFYLEGKERIIVVSGPNQGGKTTFARTFGQLHYLASLGCP
VPGREARLFICDRIFTHFEKSENIKDLRGKLQDDLVRVIEILNKATPGSIIILNEIFTST
TLSDAVFLSKKVMEKIEALDSLCVCVTFIDELSAFSEKTVSMVSMVVPENPTLRTFKVIR
KPADGLSYAISISEKYRLTYKFLKERLDHESVSHAQRP
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgactttccacagcatcctgtcagaacgggcggatatagcgatcgagaaaccgggaatg
ccctcgtttttcgtggacctgaatctggatcaggtcatagacgcgattacgtctggaaaa
caggactatgacctgaaaccatttttttactctgcattggccgatataggtagcattgta
tatcgccaggaaatattcgaggacctggaaaacttagaccttctcaatagtgtcgatacg
ttcgccgacaatatgtgcacgatgcgagaccaccttgctcaggcgaagaagcttagttat
cggtatcaaaaagaaagctggttcttggatgctgtgatcgtctattgtcatgccgtgaaa
gagctgacgcgcgaacttagccggatcgacttacgttcacgtggattttgctcatttcgt
gattttttgaccgtctactcccggtcagaccgattcacgtcactcctggaagaagcaaaa
caaattatggccgaactatccaccataaaatattccatgatcataaaagacggcacgatc
aaagtccgcaactatgagtcggaatcggactacagcgcggacgtcgagcagacctttgaa
aaattcaagcagggcgccgtgaaagattaccggtcgaacctgcccgaatacgtcgagatg
aaccatgtcgaggcaaaagtgctcgaattcatcggccttctgaatcccgagacctttacg
aggcttaacgattattatgcaaagaatcaggactatttggataaaactataagcggtttt
gaccgggaggtccaattttacatttcctatatcgatcacatcggaaaattcagcgatatc
ggattgcagttctgctatccacaaatatctaacccggggaaggatgtttacagccatgag
ggattcgaccttgccctggctaatagattaatagataaaaaatcccctatcatttgtaat
gatttttatctggaggggaaggagcgaattatcgtagtctccggccccaaccagggcgga
aaaacgactttcgcacgcacctttggccagctacactatctggccagtttagggtgccct
gtccctggcagagaggcacggctctttatatgtgaccgcatctttacgcatttcgaaaag
agcgaaaacattaaggatctccgtggaaagctgcaggacgacctcgtcagggtcatcgag
atcttgaataaggcgacgcccggcagtattatcatattgaacgagatattcacgtccacg
accttaagcgacgcggtcttcttaagtaaaaaagtgatggagaagatagaggcgctcgac
tcgttatgcgtttgcgttacatttatcgatgagttgtccgcttttagcgagaagaccgtc
agcatggtcagcatggtcgtcccggaaaatccgacgttaaggacattcaaggtcataagg
aagccggcggatggcctttcctatgcgatatccatttccgagaagtatcgccttacgtac
aaatttttaaaggagcgcctggatcatgaaagcgtttctcatgcacaaagaccgtga
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