Methanocella paludicola: MCP_2836
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Entry
MCP_2836 CDS
T01142
Symbol
rnz
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
mpd
Methanocella paludicola
Brite
KEGG Orthology (KO) [BR:
mpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mpd03016
]
MCP_2836 (rnz)
Enzymes [BR:
mpd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
MCP_2836 (rnz)
Transfer RNA biogenesis [BR:
mpd03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
MCP_2836 (rnz)
Prokaryotic type
MCP_2836 (rnz)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
BAI62908
UniProt:
D1Z2I6
LinkDB
All DBs
Position
complement(2791420..2792334)
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AA seq
304 aa
AA seq
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MLKVIFLGTGGSVPSPCRGMPSLMVVREGERMLFDCGEGTQRQMMCCRSGFMDVGSIFLT
HFHADHTLGIPGLIQTMGFQGRTEPLHIYGPKFVREYCDILNSLGYLKPAFDVVAHELRH
GDVVERNGYKVEAFRTFHSVPGLGYALMEDARLGRFDRQRALELGVPEGPLFGRLHRGED
VEVKGSIIKSSDVVGEPRPGRRIVYTGDTAPSQAFLPVLKGADLWISEATFADEASDKAA
ETLHSSSGDVARLAATAGVQRLILTHISSRYSEDITPLLEDARKYFPGVVVAEDFMEVDV
PLRE
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaggtcatcttcctcggcacgggcgggtccgtcccgagcccctgcagaggcatg
ccgtcgctaatggtcgtacgagagggcgagcgcatgctcttcgactgcggcgagggcacc
cagcgccagatgatgtgctgccgctccgggttcatggacgtgggctcgatcttcttgacg
cacttccacgcggaccacacgctgggcatccccgggctcatccagaccatgggcttccag
gggaggactgagcctctgcacatttacggcccgaagttcgtgcgggagtactgcgatatt
ttaaactcgttaggctatttgaagccggcattcgatgtggtggcgcacgagctcaggcac
ggcgacgtcgtggagcgtaacgggtataaggtcgaggcgttccgcacgttccacagcgtc
cccggcctgggctacgcgctgatggaggacgcccggcttggccggttcgacaggcagagg
gcgctggagcttggcgtgcccgaggggccgctgttcggaaggctccaccggggcgaggac
gtcgaggtcaaaggcagtataattaaaagctctgacgttgtcggcgagcccaggcccgga
aggcggatcgtctacacgggcgacaccgcgccctcgcaggcattcttacctgtgctgaag
ggcgccgatttatggatttccgaggccacattcgccgacgaggcctccgataaggcggcc
gagacgctccactcgtcctccggggacgtggcgaggctcgcggccacggcgggcgtgcag
cgcctgatactgacccacatcagcagccggtactccgaggacatcaccccactgttagag
gatgcgaggaagtacttcccgggcgtcgtcgtggccgaggacttcatggaagtcgacgtg
cctctcagggagtaa
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