Methanocella paludicola: MCP_2990
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Entry
MCP_2990 CDS
T01142
Name
(GenBank) single-stranded DNA-binding replication protein
KO
K07466
replication factor A1
Organism
mpd
Methanocella paludicola
Pathway
mpd03030
DNA replication
mpd03420
Nucleotide excision repair
mpd03430
Mismatch repair
mpd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mpd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MCP_2990
03420 Nucleotide excision repair
MCP_2990
03430 Mismatch repair
MCP_2990
03440 Homologous recombination
MCP_2990
03460 Fanconi anemia pathway
MCP_2990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mpd03000
]
MCP_2990
03032 DNA replication proteins [BR:
mpd03032
]
MCP_2990
03400 DNA repair and recombination proteins [BR:
mpd03400
]
MCP_2990
Transcription factors [BR:
mpd03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
MCP_2990
DNA replication proteins [BR:
mpd03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
MCP_2990
DNA repair and recombination proteins [BR:
mpd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
MCP_2990
MMR (mismatch excision repair)
MCP_2990
DSBR (double strand breaks repair)
HR (homologous recombination)
MCP_2990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
REPA_OB_2
CDC24_OB3
OB_Ssb-like
SHLD2_OB1
OB_MEIOB_N
POT1PC
Flagellin_D3
Motif
Other DBs
NCBI-ProteinID:
BAI63062
UniProt:
D1Z2Z0
LinkDB
All DBs
Position
complement(2942948..2944066)
Genome browser
AA seq
372 aa
AA seq
DB search
MSDVLEVYEKLNGKITQKEFKKLVDEKMDIMGGLCDEHTAALLVAHDLGIEGVNAIKIKE
ITLDKKNVQFIAKVTGASDVRKFSRNDGSEGRVCNLTVADETGEVTLVLWDELADAVMTG
DIKEGDVLKISGYVKEGQRGMEVSIGKGGGIQKDESTKITVKDPMIPIKGVQMGNGNVCV
RAMILSKQEPRSFNRKDGSKGSVQGVMIGDESGKIRLTVWDNKLKDVEALNPGDSIEVLH
AYTRESMGGVEIQVGNRGIVRRSDKKVEYEEPVSKIGDIEADKSYNVKGVVTGIDGVREF
TTKDGKLGRLCGVHLSDDTGRVRVVFWGEHANFAEALSVGDKILVTDAQAKLNFRQELEL
SANWRSAVRKIE
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgtgcttgaagtctatgaaaaactgaacgggaagatcacccagaaagagttc
aaaaagttagtggacgagaagatggatatcatgggcggcctctgcgacgagcacaccgcc
gcgttgctcgtggcccacgacctgggcatcgagggcgtcaacgccataaagataaaagag
atcacgctcgacaagaagaacgtccagttcatcgcgaaggtgaccggggcgtccgacgtc
aggaagttcagccgcaacgacggctccgagggccgggtatgtaacctcaccgtcgccgac
gagacgggcgaggtcacgttagtcctgtgggacgagctggccgatgccgtgatgaccggc
gacataaaagaaggcgacgtgctcaagatcagcggctacgtgaaggaaggccagcggggc
atggaggtcagcatcggcaagggcggcggcatccagaaggacgagagtacgaagataacc
gtcaaggacccgatgatcccaatcaagggcgtccagatgggcaacggcaacgtgtgcgtc
cgcgccatgatactgtcgaagcaggagccccgctccttcaaccggaaggacggctcgaag
ggctcggtccagggcgtcatgatcggggacgagtcgggcaagatcaggcttaccgtatgg
gataacaagctcaaggacgtggaggccctcaacccgggcgactccatcgaggttttacac
gcctacacccgggagtccatgggcggcgtggagatccaggtcgggaaccggggcattgtc
cgcaggtccgacaagaaagtggagtacgaggagcccgtgtcgaagatcggcgacatcgag
gccgataagtcctacaacgtcaaaggggtcgtgaccggcatcgacggcgtccgggagttc
accaccaaggacggcaagctcggccggctctgcggcgtccacctatcggacgatacgggc
agggtccgcgtggtattctggggcgagcacgcgaacttcgcggaggcgctctccgtcggc
gataagatattagtcacggacgcccaggcgaagctgaacttcaggcaggagctcgagctg
tccgcgaactggcggagcgcggtcaggaagatcgaataa
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integrated database retrieval system
