Methanocella paludicola: MCP_2998
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Entry
MCP_2998 CDS
T01142
Symbol
polB
Name
(GenBank) family D DNA polymerase small subunit
KO
K02323
DNA polymerase II small subunit [EC:
2.7.7.7
]
Organism
mpd
Methanocella paludicola
Pathway
mpd03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
mpd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MCP_2998 (polB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpd03032
]
MCP_2998 (polB)
Enzymes [BR:
mpd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MCP_2998 (polB)
DNA replication proteins [BR:
mpd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
D-family DNA polymerases
MCP_2998 (polB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
Metallophos
Metallophos_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
BAI63070
UniProt:
D1Z2Z8
LinkDB
All DBs
Position
complement(2951448..2952875)
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AA seq
475 aa
AA seq
DB search
MDGIEIVKALASKGYMVEPDALDALGRDPDPGILDRLVSGLDPSALTVTRDDVARSLRAG
NIAEQTARKPALRILSDITNNSTCIGDYDEFVGYFRDRYGRLGDMMRHRISARPIESIKK
KGFSRGEKSEVAVIGMVSDVRDTANGNRLVELEDRTGSMGVLISKDKDFFDSPLLLDEVV
GVSGTVKEGGLLMASGVIYPDVPNTNVPRRSDEPAAVALISDVHIGSNTFLEDPWMRFID
WLNGDSDAHHDLASRLKYVVVAGDMVDGIGVYPGQEKELHIADVYDQYRKAAEYFDQFPR
HLKIVIAPGNHDAVRQAEPQPALPEEVRRMFRHPNVTFAGNPSAVEMEGVRLLIYHGRSL
DDLVSNLPGASYSKPEKAMAELLKRRHLSPIYGGKVMIAPEAKDHFVIDPLPDIMHSGHV
HTVGVCRYRGVTLVNSGTWQSQTDFQKRMNIQPDPARIPIVDLQNGDVKIVDFGE
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggacggcattgagatcgtaaaagcgctcgcgtcgaaggggtacatggtcgagcccgac
gccctggacgcgcttggcagggaccctgaccccgggatactggacaggctggtgtccggc
ctcgacccctccgccctcaccgtcaccagggacgacgtggcccgctcgctacgagcgggc
aacatcgcggagcagacagcccgcaagccggcgctcaggatcctgtcggatatcaccaat
aattccacctgtatcggcgactacgacgagttcgtcgggtacttcagggaccggtacggg
cggctgggcgatatgatgcgccaccgcatcagcgcccgcccgatcgagagcatcaaaaag
aagggcttttcccggggcgagaagtcggaggtggccgtcatcggcatggtgtcggacgtc
cgggacacggcgaacggcaaccgcctggtcgagctggaggaccgaacgggctcgatgggc
gtgctcatctccaaggataaggacttcttcgactcgccattgttattagacgaggtggtc
ggggtctcggggaccgtgaaggaaggcgggctgctcatggccagcggggtcatatacccg
gacgtgcccaacaccaacgtgcccaggcgctccgacgagcccgcggccgtcgcgctcatc
tcggacgtgcacatcggcagcaacacttttctcgaggacccgtggatgcggttcatcgac
tggctgaacggcgactccgacgcccaccacgacctggcgtcgaggctgaagtacgtcgtg
gtggccggggacatggtggacggcatcggcgtgtacccgggccaggagaaggagctccac
atcgcggacgtctacgaccagtacaggaaggccgccgagtacttcgaccagttcccccgg
cacctgaagatcgtcatcgccccggggaaccacgacgccgtgaggcaggccgagccccag
cccgccctgcctgaggaggtccggaggatgttcaggcacccgaacgtcacgttcgccggc
aacccttctgcagtggaaatggagggggtcaggctgctcatctaccacggccggtcttta
gacgatctggtgtcgaacctgcccggcgcctcgtactcgaagcccgagaaggccatggcc
gaattactgaagcgccgccacctctcgcccatatacggcggcaaggtgatgatcgccccc
gaggcgaaggaccacttcgtcatcgatccgctccccgacatcatgcacagcggccacgtg
cacaccgtgggcgtatgccgctacaggggcgtcacattagtcaattcgggcacctggcaa
tcccagaccgacttccagaagcggatgaacatccagccggaccccgcccgcatccccatc
gttgacctgcagaacggtgacgtcaagatcgtggacttcggggaatga
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