Malacoplasma penetrans: MYPE800
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Entry
MYPE800 CDS
T00107
Symbol
MYPE800
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mpe
Malacoplasma penetrans
Pathway
mpe03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mpe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MYPE800 (MYPE800)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpe03021
]
MYPE800 (MYPE800)
03400 DNA repair and recombination proteins [BR:
mpe03400
]
MYPE800 (MYPE800)
Enzymes [BR:
mpe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MYPE800 (MYPE800)
Transcription machinery [BR:
mpe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MYPE800 (MYPE800)
DNA repair and recombination proteins [BR:
mpe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MYPE800 (MYPE800)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
SAM_KIDINS220
DUF4522
YnfE
Motif
Other DBs
NCBI-ProteinID:
BAC43870
NIH_Japan:
800
UniProt:
Q8EWX0
LinkDB
All DBs
Position
92365..96231
Genome browser
AA seq
1288 aa
AA seq
DB search
MNSKSSRITSIQIGLASPEKIREWSNGEVTKSETINYKSLKPEKDGLFDEAIFGPVKDYE
CACGKYKKIKFRGKICEKCGVEITESIVRRERVGHIELAAPIAHIWMTKELPCPSKISLV
LDISYKEIEQVVYFVNYIVLDEGNGKFPKNFNFKEVIDLSSQKSSKETRSKLRKTLREIY
ESIDVEASMENAIKHKIARTFYDTLAESNMPFSIEEVFNFISSFTGMRFGIGAEAILELL
KNIDLDKEYKDIYEKLRKSENTSDIKTKKLVRRLEAIKWLKDSNNKPEWMILKNIVVTPP
DTRPIIQLEGGKFTTSDINSFYRKIIIRNERLKRVIQNNAPSIILNNEKRLLQEAVDALF
DNASRKKPLLGKDKRPLKSLSEHLKGKQGLFRQNLLGKRVDYSGRSVIVIGPELKMYQVG
IPVSMILKLFKPFIIHELIKKTDDEGNTKDPIVSNIKSAEKLILNQDNTIWPIINKVIKQ
RPVLLNRAPTLHRLGIQAFEPILVEGKAIRLHPLVTTAFNADFDGDQMAVHVPLSPEAVA
EARTIILASWHILGPKDGKPIITPTQDMVLGNYYLTMEKLNMPGQGMLFANVDELKTVYQ
MKKVHVHSIIGIPTSAFPKKQFPKDGILITTVGKVILNDVLPEEMSYLNNPDNLEELSDN
DIVEWGKDYRTFIEKKKVYKAFTKKTLSEIVNILHRKYSDASLEIVPSTMDKIKDIGFEY
STKSATTISAFDVPEYTEKEKYFEETDKKVEEMKKYYQKGLLTDDERYKKVVSAWSSVTN
QVSKDIEKLIQKPEYLTNSIVIMANSGARGNISNFTQLSGMRGLMSKSYNYDQKQKSKVI
KDTIEVPIKNSFIEGLTVSEYFNSSYGARKGMTDTAMKTSKSGYMTRKLVDATQDVIVNN
EDCKTKKGTILEVIEDTKSGSVIESLNERLINRFPIFDVVHPKSKKVLAPAGEIITKAVA
NEIVDAGIDKVEVRSVLHCKEENGICQKCFGTDLTTNKLVEKYTAIGVIAAQSIGEPGTQ
LTMRTFHTGGVSSGTNIAQGFERLKQLFDIIPPKQWEKSIISEIEGKVSSIKASPDNPNI
LVVTIKNSKESINYKVPFDSELRVEEGDKVKPGSKITEGSIDVKELLKVAGIEVVRNYII
KEVQKVYRLQGIEIADKYIEVIIRQLTNKVQIQDSGNSDFFIGQIIDINTFRKENEKLIL
SDDKVPATAVNLIFGLDEAPSKTGSFLAAASFQDTKKILTDACVKGQIDSLNGLKENVIF
GNLIPCGTGKKSNEDIIEEGNKMYELEY
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atgaattcaaaatcatctagaattacaagtattcaaattggactagcttctccagaaaaa
attagagaatgaagtaatggtgaagttacaaagtctgaaactattaactataaatctctt
aaacctgaaaaagacggtttatttgatgaagctatttttggtcctgttaaagattatgaa
tgtgcttgtggtaaatacaagaaaatcaaatttagaggaaaaatttgtgaaaaatgtggt
gtggaaatcactgagtctattgttagacgtgaaagagttgggcacattgaattagcggct
cctattgctcatatttgaatgactaaagaacttccttgtccttcaaaaatatctttagtt
ttagatatttcatataaagaaattgaacaagtagtttactttgtaaattacattgtatta
gatgaaggaaatggaaaattccctaaaaactttaacttcaaagaagtaattgatttatct
agtcaaaaaagttcaaaagaaacaagaagtaagttaagaaaaacacttcgtgaaatttat
gaatcaattgatgtagaagcatcaatggaaaatgcaattaaacataaaattgctagaact
ttctatgacacattagctgaatctaacatgccttttagtattgaagaagtttttaacttc
attagttcttttacaggtatgcgttttggaattggtgctgaagcaattttagaattactt
aaaaatattgatcttgataaagaatataaagacatttatgaaaagcttagaaaaagtgaa
aatacaagtgatatcaaaacaaaaaaacttgtaagaagacttgaagctattaaatgatta
aaagattctaacaacaaacctgaatgaatgattctaaaaaacattgttgttactcctcct
gatactagaccaattattcaactagaaggtggaaaattcactacaagtgatatcaacagt
ttttatagaaaaattattattagaaatgaacgtctaaaaagagttattcaaaacaatgct
ccatctattattttgaataatgaaaaaagattgttacaagaagcagttgatgcattattt
gataatgcttcaagaaagaaaccattacttggtaaagataaaagaccattaaaatcttta
tctgaacacttaaaaggtaaacaaggtttatttagacaaaacttattaggtaaaagagtt
gactactctggacgtagtgttattgttattggtcctgaattgaaaatgtaccaagttggt
attccagtttcaatgatcttaaaattatttaaaccattcattattcatgaattaattaaa
aagactgatgatgaaggaaatacaaaagatccaattgtttcaaatattaaatctgcagaa
aaactaattctgaaccaagacaatactatttgaccaattattaataaagtaattaaacaa
agacctgttcttttaaacagagccccaacattacaccgtttaggaattcaagcttttgaa
cctattttagttgaaggtaaagctattagacttcacccacttgttacaactgcatttaat
gcggactttgatggggaccaaatggctgttcatgtacctttatctccagaagctgtagct
gaagctagaacaattattttagcttcttgacatattttaggtccaaaggatgggaaacct
attattactccaactcaggatatggttttaggtaattactatctaactatggaaaaacta
aatatgccaggtcaaggtatgttgtttgcaaatgtagatgaactaaaaactgtttatcaa
atgaaaaaagttcatgttcattctattatagggattcctacaagtgcatttcctaaaaaa
caattccctaaagatggaattctaattacaactgttgggaaagttattttaaatgatgtt
ttaccagaagaaatgtcataccttaacaatccagacaatttagaagaattatctgataat
gacattgttgaatgaggaaaagattatagaacttttattgaaaagaaaaaagtatataaa
gctttcactaaaaaaacattgtctgaaattgtaaatattttacatagaaaatattcagat
gcttcattagaaattgttccatcaacaatggataaaattaaagatattggttttgaatat
tctacaaaatcagctacaactatttctgcttttgatgttccagaatatactgaaaaagaa
aaatattttgaagaaactgataaaaaagttgaagaaatgaaaaaatactatcaaaaaggt
ctattgactgatgatgaaagatataaaaaagttgtatcagcttgaagttcagtaacaaac
caagtttctaaagatattgagaaattaattcaaaaacctgaatatttaacaaactcaatt
gtgattatggctaactctggtgcccgtggtaacatttcaaactttacacagttatcaggt
atgagagggctgatgtcaaaatcttataactatgaccaaaaacaaaaatcaaaagttatt
aaagatacaattgaagttccaattaaaaactcattcattgaaggtttaacagttagtgaa
tactttaactcatcttatggtgctagaaaagggatgactgatactgcaatgaagacatct
aaatctggttatatgactagaaaattagtagatgctactcaagatgtaattgttaataat
gaagattgtaaaactaaaaaaggtacaattcttgaagttattgaagatacaaaatcagga
tctgttattgaaagcttaaatgaaagattgattaatagattcccaatctttgatgtagtt
catccaaagagcaaaaaagttctagctcctgctggtgaaattattacaaaagctgtagct
aatgaaatagtagatgctggaattgataaagttgaagtaagaagtgtacttcactgtaaa
gaagaaaatggaatctgtcaaaaatgttttggaacagatttaacaactaataaattggtt
gaaaaatatactgctattggtgtaattgctgctcaatcaattggtgaacctggtactcag
ttaaccatgagaacattccatactgggggtgtaagtagtggtactaacattgcacaaggt
tttgaaagattaaaacaattgtttgatattattcctccaaaacaatgagaaaaatcaatt
attagtgaaattgaaggtaaagtaagttcaattaaagcttcacctgacaacccaaacatt
cttgtagttactattaaaaattcaaaagaatcaattaattacaaagttccttttgattct
gaattaagagttgaagaaggtgacaaagtaaaacctggtagcaaaatcacagaaggttct
attgatgttaaagaattattaaaagtagcaggaattgaagttgtaagaaactacattatt
aaagaagttcaaaaagtttatagattacaagggattgaaattgctgataaatatattgaa
gttattatcagacaattaactaacaaagttcaaattcaagattctggaaactctgacttc
ttcattggacaaatcattgatattaatacatttagaaaagaaaatgaaaaattaatatta
tcagatgataaggttccagcaactgcagttaacttaatctttggattagatgaagctcca
tctaagactggatcattcttagcagcagcaagtttccaagatacaaagaaaatcttaaca
gatgcttgtgttaagggacaaatcgattctttaaatggtctaaaagaaaatgttatcttt
ggtaacctaatcccttgtggtactggtaagaagagcaatgaagacatcattgaagaagga
aataaaatgtatgaattagaatactaa
DBGET
integrated database retrieval system
