Malacoplasma penetrans: MYPE8890
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Entry
MYPE8890 CDS
T00107
Symbol
MYPE8890
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
mpe
Malacoplasma penetrans
Pathway
mpe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mpe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MYPE8890 (MYPE8890)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpe03400
]
MYPE8890 (MYPE8890)
DNA repair and recombination proteins [BR:
mpe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MYPE8890 (MYPE8890)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MYPE8890 (MYPE8890)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_30
AAA_22
AAA_19
PIF1
AAA_7
Kinesin
SWI2_SNF2
Cas3-like_C_2
FtsK_SpoIIIE
AFG1_ATPase
AAA_5
TRAPPC10_1st
DUF87
hAT-like_RNase-H
AAA
Motif
Other DBs
NCBI-ProteinID:
BAC44680
NIH_Japan:
8890
UniProt:
Q8EUN2
LinkDB
All DBs
Position
complement(1194933..1196921)
Genome browser
AA seq
662 aa
AA seq
DB search
MNTNKNTVFDLKSKFKPSGDQPQAIEKIVKGFKEDKFKSQVLVGATGTGKTFTMANIIQS
LNCKTLVLAHNKTLAAQLYSEFKEMFPDNKVEYFVSAFDFYQPEAFLPKTNTYIEKNSQS
NNDIEMLNLSALNSLIERDDVIVVASVAAIYASSPPDDFFKNRVAYKKNQVIPIKQVQYE
LVNLNYQRNDVDVTHGRFSVKGDLMEIGPGFTDEFNYRISFFGDEIEEIAKIDPLTKQVI
TKLDEIVLPGAEVYLANRDTLEESLKRIKDELTETHKNFLKQNKLIEAQRILERTNHDIE
SFKEFGFCPGIENYSRHLELRAQGQTPYTIFDYFDKDWLLIVDESHMMVPQIRGMYNTDR
SRKETLVEYGFRLPSALDNRPLNFNEFLSKTDKKLYVSATPNEWEIEESQQITEQIIRPT
GLVDPIIEIRPTQDQILDIEQELRKQIANKERTFITVMTIRLAEELTEYLRNKNIKVAYL
HNELKTIERFKILNNLRKGIYDVVIGINLLREGLDVPEVSKVLILDADKPGFFRSDKSLI
QIIGRASRNVNGKVIMYADTITEAMDKAIKETERRRNIQIEFNKKHNITPKTVIKPIALD
LSKNDADINIDELISKNKKSKEKIDRTVKKLREEMLAAAKNQEYERAAYIRDIIMELEAN
KK
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaaataaaaatactgtttttgatcttaaaagtaaatttaaaccaagtggagat
caaccacaagcgattgaaaaaattgttaagggttttaaagaggataaattcaaatctcaa
gtattagttggtgcaacaggtactgggaaaacttttacaatggcaaacattatccaatca
ttgaattgtaaaacattggtattggcccataataaaactttagctgctcaattatattct
gagtttaaagaaatgtttccagataacaaagtagaatactttgtatctgcttttgatttt
tatcaaccagaagcctttcttcctaaaactaatacttatattgaaaagaactctcaatct
aacaatgatatagaaatgttaaacttatcagccttaaattcattaattgaaagagatgat
gtaatagtagttgctagtgttgcagcaatttatgcttcttctccaccagatgatttcttt
aaaaatagagttgcatataaaaaaaatcaagttatcccaataaaacaagttcaatatgaa
ttagttaatttaaactatcaaagaaatgatgtggatgtaactcatggtaggttttcagtt
aaaggagatttaatggaaattggtccagggtttacagatgagtttaattatagaatttca
ttttttggtgatgaaatagaagagattgcaaaaattgatcctttaactaaacaagtaata
actaagctagatgaaatagttttaccaggtgctgaagtttatttagctaatagagatact
ttagaagaatctttaaaaagaattaaagatgagttaacagaaactcataagaatttttta
aagcaaaataaactaattgaagctcaaagaattttagaaagaacaaaccatgacattgaa
tcttttaaagaatttggtttttgtcctggaattgaaaattattctagacatctagaactg
agagcacaaggtcaaactccttatacaatttttgattactttgataaagattgattatta
atagttgatgaatctcatatgatggttcctcaaattagaggtatgtacaatactgataga
agtagaaaagaaacattagtagaatatggatttagattaccaagtgctttagataataga
ccattaaactttaatgaattcttatctaagacagataaaaaattatatgtttcagctact
ccaaatgaatgagagattgaagagtctcaacaaatcactgagcaaattattagaccaact
ggattagtagatccgattatagaaattagaccaacacaagatcagattttagatattgag
caagaactaagaaaacaaatagctaataaagaaagaacatttattactgttatgacaatt
agacttgcagaagagttaactgaatacttaagaaataagaatatcaaagtagcatatctt
cataatgaattaaaaactattgaaagatttaaaattcttaataacttaagaaaagggatt
tatgatgttgttattggtattaatcttttaagagaaggattagatgttcctgaagtttca
aaagtattaattttagatgcagataaaccgggtttttttagaagtgataaatctttaatt
caaattattggaagagcttctagaaatgtaaatggtaaagtaatcatgtatgctgacaca
attacagaagcaatggataaagcaatcaaagaaactgaaagaagaagaaatattcaaatt
gagtttaataaaaaacataacatcactcctaaaacagttattaaaccaattgcattagac
ttaagtaaaaatgatgctgatattaatattgatgaattaatttctaaaaataaaaaatct
aaagagaaaattgatagaacagttaaaaaacttagagaagaaatgttggctgcagcaaaa
aaccaagagtatgaaagagctgcttatattagagatattattatggagttagaagcaaat
aagaaataa
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integrated database retrieval system
