Mannheimia pernigra 17CN0883: HV560_03140
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Entry
HV560_03140 CDS
T07233
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
mpeg
Mannheimia pernigra 17CN0883
Pathway
mpeg00540
Lipopolysaccharide biosynthesis
mpeg01100
Metabolic pathways
mpeg01250
Biosynthesis of nucleotide sugars
Module
mpeg_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
mpeg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
HV560_03140 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
mpeg01005
]
HV560_03140 (rfaD)
Enzymes [BR:
mpeg01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
HV560_03140 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
mpeg01005
]
Core region
HV560_03140 (rfaD)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
Motif
Other DBs
NCBI-ProteinID:
QLB41895
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Position
complement(637478..638404)
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AA seq
308 aa
AA seq
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MIIVTGGAGMIGSNIVKALNEIGRTDILVVDNLKNGEKFINLVDLNIADYCDKEDFIASI
IAGDDFGNIDAVFHQGACSATTEWDGKYLMQNNYEYSKELLHFCLDRQIPFFYASSAATY
GGRSDNFIEKREFESPLNAYGYSKFLFDEYIRRILPEAESPVCGFKYFNVYGPREQHKGS
MASVAFHLNNQMLKGENPKLFAGSEQFLRDFIYVEDVAKVNIWAWQHNISGIFNLGTGQA
ESFQEVANAVIKYHGKGEIETIPFPDHLKSRYQTFTQADLTKLRAAGYTDNFKTVAEGTA
EYMAWLNG
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgattattgtaactggtggcgctggaatgattggcagtaatattgtcaaagcgttaaat
gaaattggccgtactgatattttagtggtagataacctaaaaaacggcgaaaaatttatc
aacctagttgatttaaatattgccgactactgcgataaagaagactttatcgcctcaatt
attgctggcgatgattttggcaatattgatgctgttttccatcaaggggcttgctctgca
acaactgaatgggacggaaaatacttaatgcaaaataactacgaatattcaaaagagtta
ttgcatttctgcttagatcgccaaattccatttttctacgcgtctagtgcggcaacctat
ggcggacgctctgataattttatcgaaaaacgtgaatttgaaagcccattaaatgcttac
ggctactccaagttcttgtttgatgaatatattagacgtattctgccagaagcggaatct
ccagtttgtggcttcaaatactttaacgtttatggtccgcgtgaacagcacaaaggctca
atggcaagtgtggctttccatctcaacaaccaaatgctaaaaggcgaaaacccaaaatta
tttgcaggatcagaacaatttttacgcgattttatctatgtagaagatgtagcaaaagta
aacatttgggcatggcaacacaacatttcaggcatttttaatcttggcacaggtcaagca
gaatctttccaagaagttgcaaatgcagtaattaaatatcacggtaaaggggaaatagaa
accattccattcccagatcatttaaaatctcgctaccaaacctttactcaagccgattta
actaagctaagagcggcaggctatacagataactttaaaacggtcgcagaaggaaccgcc
gagtatatggcttggctgaatggataa
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