Mannheimia pernigra 17CN0883: HV560_03480 Help Entry HV560_03480       CDS       T07233                                  Name (GenBank) YadA-like family protein   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism mpeg  Mannheimia pernigra 17CN0883 Pathway mpeg04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:mpeg00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     HV560_03480  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:mpeg00536]     HV560_03480 Glycosaminoglycan binding proteins [BR:mpeg00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    HV560_03480 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen YadA_head YadA_stalk YadA_anchor Trp_ring Motif Other DBs NCBI-ProteinID:  QLB41949 LinkDB All DBs Position 702342..707762 Genome browser AA seq 1806 aa AA seqDB search MLNQGKCRSTVKILTLSALAASVILSIPNAVAQLTPVPPPTNATHRITGNAIDYTCISNL GELQGGDFNDDFDRLMERCGGNDVYKNNMTYLFDPIYGRLSLGYGAWADREYGVAIGYDT KANAKYSTAVGSKAKADGVNASAFGADAQASEIAATALGTAAKAMSGASIAVGTSVAVAT ESIAVGTGAIAGTDDYYERIINNDLQIDEFRNLAYLEELKKQNKAEDELTLEEKKEILNA AATKANEEMKKLKDNAQKVKAGFQSIAIGSHASTNGDDSIALGHSAIAYKHNAMALGLES EAFGESSIAFGVDSEAGGLYSTALGHRTHAYARGATALGERAEVAFGATVGTALGAGAYV SVLGESGTAIGTAAQVYAQYSTAVGSNAQARKQGAVALGANSLADRAGLPEGATTASTTP NAAQNSVYSPTNTAEDNAEILATVKGTENGAVSVGATDETTRQIINVAAGSADSDAVNVA QLKATAAKYFADKDLSADKPAIDTATAKTMPNRVLGIKGKETAAQTDTKTEKKDTDAKNR ADTQNIITTIDTVTNTVSVELSSHVKGLSSLQFDAQQGVKIGDKDTSAVANSVAIGRGAT VASGQNPGIGYRQNPNFSTDHNTVAPTQVSQNIKVFQSINGVALGDKATAGKGATAIGGY AQAKGTYAVGVGSAVSAKGYNSVAIGQGAQATGNSTLSMGRESVASGSYATAIGNVASAI ADGAFAVGHSAQATGKRTIAIGAVETDGKNTDGVHNPNGTRATADDAIALGTGAYASKIN AIAIGTGAKALGDNAISIGKGNTVNGNNSGALGDPSTIDANNSYSVGNDNNLVQGQNDVF ALGNSITQTTNNSVFLGSNSAYTVGNNTAGLVKAADATINNVTYGNFVGNADITTGVISV GDKDKERRIQNVAAGAITESSTDAINGSQLYFVAKGTLDQIPVIYVNKDGKKVYKKPDGT FVDEDGATVTVTGDNPLSVALKNHDGSTKTPMILNNLKSGLTKVDGTGLLNLNDPKIKDD TAATVGDLRAMAWAIGTGNVGAPVNDFTFSKVIQNGGMVKFVGDNGVQVSGKTTADGVQL ITVKGTSISKQERDYGYDLTIIKPDGTQEVLTIKNGAKGDRGEAGPKGEAGAVGPTGPIG PQGPAGAKGDRGEVGPKGEAGAVGPTGPIGPQGPAGAKGDRGEAGPKGEAGAVGPTGPIG PQGPAGAKGDRGEAGPKGETGAVGPTGPIGPQGPAGAKGDRGEAGPKGETGAVGPTGPIG PQGPEGAKGDRGEVGPKGETGAVGPTGPIGPQGPAGAKGDRGEAGPKGETGAVGPTGPIG PQGPAGAKGDRGEAGPKGEAGAVGPTGPIGPQGPAGAKGDRGEAGPKGETGAVGPTGPIG PQGPAGAKGDRGEAGPKGETGAVGPTGPIGPQGPEGAKGDRGEVGPKGETGAVGPTGPIG PQGPAGAKGDRGEAGPKGETGAVGPTGPIGPQGPAGAKGDRGEAGPKGETGAVGPTGPIG PQGPAGAKGDRGEAGPKGEAGAVGPTGPIGPQGPAGAKGDRGEVGPKGETGAVGPTGPIG PQGPAGAKGDRGEAGPKGEAGAVGPTGPIGPQGPQGPGGQLQSELDNIGWELTVVGNTAK DSEQGSKKVKNKGNVTVSGGKNMVVSRKDSTVEVATSSTPEFDTVKVGNTTISSSIAQDG VNEVNLVGANNAPTRITNVAPGVKGTDAVNVNQLKGAVSHLDNKINRNNRNLRAGIAGAN AAAGLPQVYIPGKSMIAASAGTFKGENAVAVGYSRSSNNGKLILKLQGNANTSGDFGGSM GVGYQW NT seq 5421 nt NT seq  +upstreamnt  +downstreamnt atgctaaatcaaggaaagtgccgtagcactgtcaaaatattaacgctgagtgcattggct gcttcggtcatcctttctattccaaatgcagttgctcagcttacgcctgtacctcctcca acaaacgccactcatcgcataacagggaacgcgatcgattacacttgtatttccaactta ggagaattgcaaggaggggattttaatgatgactttgataggttaatggaaagatgtggc ggcaatgatgtttataaaaacaatatgacctatctttttgatccgatatatgggagattg tcattaggatatggtgcttgggctgatcgtgaatatggcgtagcaattggctatgacaca aaagcaaatgctaaatatagtacagcagtgggcagcaaggcaaaagctgatggcgtgaat gcatcagcatttggtgcagatgctcaagcgagcgaaattgctgcaaccgcattaggtacg gctgccaaagctatgagtggtgcaagtatcgctgtcggtacttctgttgctgtggctaca gaaagcattgctgttggtacaggtgctattgcaggtactgatgattattatgagaggatt ataaataatgacttacaaattgacgagtttcgaaatttagcttatttggaggaactaaaa aaacaaaacaaggcggaagatgagcttactttagaggaaaaaaaagagattttgaatgct gctgctacaaaagccaacgaagagatgaaaaagctaaaagacaatgctcaaaaagttaaa gctgggttccaaagcattgccattggttcgcatgcatcaaccaatggagacgacagcatt gcgttaggccactctgcaatcgcttacaaacataatgcaatggcattgggtcttgaatcc gaggccttcggcgagagtagcattgcctttggtgtagactcagaagcggggggcttgtac tccaccgctttagggcatcgtacacatgcatatgccagaggtgccaccgctttgggtgaa agggcagaagtagccttcggtgctacagttggcaccgcattgggtgcgggtgcttatgtt tcagttttaggcgaatctggtactgccatcggtacagcagcacaagtttatgcacagtat agcacggcggttggttcaaatgctcaagcaagaaaacaaggtgcggtcgcattgggtgca aactctttggcagatcgtgctggactgccagaaggtgcaaccaccgccagcaccacaccg aatgctgcccaaaacagcgtgtattcgccaaccaataccgcagaagataacgcagagatt ttggcaaccgtcaaaggcactgaaaatggtgcagtgtcggtaggtgcaacagatgaaacc actcgccaaatcatcaatgtggccgcagggagtgccgactctgatgcggtcaatgtggca cagttaaaagccacggccgccaaatactttgccgataaagatttgtctgctgacaagcct gccattgatacagccaccgccaaaactatgcctaatcgtgtgctaggaattaagggtaaa gagacagctgctcaaacagacacaaaaacagaaaaaaaagatacagatgctaaaaatcgt gctgatacccaaaatatcatcaccaccattgacactgtcaccaacactgtatcggtggag ctaagttcgcatgtgaagggtttgtctagcttgcagtttgacgcccagcaaggggttaaa attggtgataaagataccagtgctgtagctaattctgtggcgattggtaggggggctact gttgcaagtggtcagaatccaggcattgggtatagacaaaatcctaatttttcaaccgac cataacaccgtagcacccacgcaggtttcccaaaatatcaaagtatttcaatctataaat ggtgtggcattgggcgataaagccaccgcaggaaaaggggcaactgctatcggtggatat gcccaagctaaaggcacttatgcagtaggcgtgggttcagcagtatccgccaaaggttat aatagtgtcgctatcggtcagggggcgcaggcaacaggcaatagcacgctctctatgggg cgtgaatcggtagcatctggtagttatgcgaccgctatcggcaatgtggcatctgccata gcagatggtgcatttgcagtagggcattcagcacaagccacaggtaagcgtacgattgcc attggggcggtagaaactgatggcaagaataccgatggcgtgcataatccgaatggtact cgtgccactgcagacgatgcgattgcgttaggtacaggtgcgtatgctagtaagataaat gctattgccatcggtacaggtgcaaaagcacttggcgacaatgcgatttctatcggtaag ggcaataccgttaatggcaacaattcaggtgctttgggtgatccaagcactattgatgcc aataattcctattcggtgggtaatgataataacttggtacaaggacaaaacgatgtcttt gccttaggtaatagtattacccagactactaataactctgtatttttaggttcaaattca gcctataccgtaggtaataatactgcaggtttggtaaaagcagcagatgctactattaat aatgttacctatggcaattttgtaggcaatgcagatatcaccacaggtgtgatctcggtg ggtgataaagacaaagaacgccgtatccaaaatgtggcggctggtgctattaccgagagc tcaaccgatgcgattaacggatcgcagctatactttgtggcaaaaggtactttggaccaa attcctgtcatctatgtcaacaaagacggtaagaaagtgtacaaaaagcctgatggcact tttgttgatgaagatggtgctacagtaacagtcaccggagacaatccgctcagcgttgcg ttgaaaaatcatgatggctctaccaaaacgccaatgattttaaacaatctgaaaagtggt ttgactaaggtagatggtacagggcttttgaatcttaatgatccgaaaatcaaagatgac acggcagccacagtgggcgatttgcgtgcgatggcttgggcgattggtactggcaatgtg ggtgctcctgtgaatgactttacatttagtaaggtcattcaaaacggtggtatggtaaag tttgtcggtgataatggcgtacaggtatcaggcaaaactactgctgacggtgtgcagctt atcactgttaagggtaccagtatcagcaaacaagagcgcgattatggctatgatttaacc atcatcaagccagacggcacccaagaagtactaacgatcaaaaacggtgccaaaggcgac cgtggtgaagcgggtcctaaaggtgaagcaggtgctgtagggccaacagggcctatcggt ccacaggggccagcgggtgccaaaggtgaccgtggtgaagtgggtcctaaaggtgaagca ggtgctgtagggccaacagggcctatcggtccacaggggccagcgggtgccaaaggtgac cgtggtgaagcgggtcctaaaggtgaagcaggtgctgtagggccaacagggcctatcggt ccacaggggccagcgggtgccaaaggtgaccgtggtgaagcgggtcctaaaggtgaaaca ggtgctgtagggccaacagggcctatcggtccacaggggccagcgggtgccaaaggtgac cgtggtgaagcgggtcctaaaggtgaaacaggtgctgtagggccaacagggcctatcggt ccacaggggccagagggtgctaaaggcgaccgtggtgaagtgggtcctaaaggtgaaaca ggtgctgtagggccaacagggcctatcggtccacaggggccagcgggtgccaaaggtgac cgtggtgaagcgggtcctaaaggtgaaacaggtgctgtagggccaacagggcctatcggt ccacaggggccagcgggtgccaaaggtgaccgtggtgaagcgggtcctaaaggtgaagca ggtgctgtagggccaacagggcctatcggtccacaggggccagcgggtgccaaaggtgac cgtggtgaagcgggtcctaaaggtgaaacaggtgctgtagggccaacagggcctatcggt ccacaggggccagcgggtgccaaaggtgaccgtggtgaagcgggtcctaaaggtgaaaca ggtgctgtagggccaacagggcctatcggtccacaggggccagagggtgctaaaggcgac cgtggtgaagtgggtcctaaaggtgaaacaggtgctgtagggccaacagggcctatcggt ccacaggggccagcgggtgccaaaggtgaccgtggtgaagcgggtcctaaaggtgaaaca ggtgctgtagggccaacagggcctatcggtccacaggggccagcgggtgccaaaggtgac cgtggtgaagcgggtcctaaaggtgaaacaggtgctgtagggccaacagggcctatcggt ccacaggggccagcgggtgccaaaggtgaccgtggtgaagcgggtcctaaaggtgaagca ggtgctgtagggccaacagggcctatcggtccacaggggccagcgggtgctaaaggcgac cgtggtgaagtgggtcctaaaggtgaaacaggtgctgtagggccaacagggcctatcggt ccacaggggccagcgggtgccaaaggtgaccgtggtgaagcgggtcctaaaggtgaagca ggtgctgtagggccaacagggcctatcggtccacaggggccacaaggcccaggcggtcaa ttacagagtgaattagataacatcggttgggagctaactgttgtaggcaatacggctaaa gattcagaacagggatctaaaaaggtgaaaaataaggggaacgtaacggtttctggtggt aaaaatatggttgtttcacgtaaagattcaacagttgaagttgccacttcaagtactcct gaatttgataccgtgaaagtaggcaataccactatcagttcatctattgcacaagatggt gtaaatgaagtgaacttggtgggggcgaataatgcaccaacacgcattacaaatgttgct ccaggtgtgaaaggcacagatgcagtgaatgtaaaccagttaaaaggtgcggtaagtcat cttgataataagatcaaccgtaacaatcgtaacttgcgagcaggcattgcaggggcgaat gccgcagcaggcttaccacaggtttacattccaggtaaatcaatgattgctgcatcagca ggcactttcaaaggtgaaaatgcagttgcagtgggttactctcgctcaagcaataacggc aaacttatcttgaaattacaaggtaatgcgaatactagcggagacttcggtggctctatg ggagttggttaccagtggtaa

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