Mannheimia pernigra 17CN0883: HV560_05115
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Entry
HV560_05115 CDS
T07233
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
mpeg
Mannheimia pernigra 17CN0883
Pathway
mpeg00260
Glycine, serine and threonine metabolism
mpeg00460
Cyanoamino acid metabolism
mpeg00630
Glyoxylate and dicarboxylate metabolism
mpeg00670
One carbon pool by folate
mpeg00680
Methane metabolism
mpeg01100
Metabolic pathways
mpeg01110
Biosynthesis of secondary metabolites
mpeg01120
Microbial metabolism in diverse environments
mpeg01200
Carbon metabolism
mpeg01230
Biosynthesis of amino acids
mpeg01240
Biosynthesis of cofactors
mpeg04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
mpeg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HV560_05115
09102 Energy metabolism
00680 Methane metabolism
HV560_05115
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HV560_05115
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HV560_05115
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HV560_05115
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HV560_05115
Enzymes [BR:
mpeg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HV560_05115
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
Cys_Met_Meta_PP
Phage_capsid
Motif
Other DBs
NCBI-ProteinID:
QLB42232
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Position
complement(1038990..1040252)
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AA seq
420 aa
AA seq
DB search
MLKRDMNIADYDAVLWQAIQNEDRRQEEHIELIASENYASPRVMQAQGSQLTNKYAEGYP
NKRYYGGCEYVDIIEQLAIDRAKELFGADYANVQPHSGSQANAAVYMALLNPGDTILGMS
LAHGGHLTHGASVSFSGKVYKAEQYGITAEGFIDYDALRKQAQEVKPKMIVAGFSAYSQL
IDWAKMREIADEVGAYLFVDMAHVAGLIAAGVYPNPLPYAHVVTTTTHKTLAGPRGGLIL
SASGDEEMYKKLQSAVFPAGQGGPLMHVIAAKAVCFKEALEPEFKAYQQQVVKNAKAMVE
VFKQRGFDVVSNGTENHLFLVSFVKQGLTGKAADAALGAANITVNKNSVPNDPQKPFITS
GIRVGSPSVTRRGFKEQDVVALASWMCDVLESIGKDNHEQVIAETKAKVLDICKRLPVYA
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaacgtgatatgaatatcgcagattatgatgctgttttatggcaggctattcaa
aatgaagatcgccgtcaagaagagcatattgagttaattgcgtcagaaaactacgcaagc
ccacgtgtaatgcaagctcaaggctcacaattaaccaataaatatgcagaaggttatcct
aataaacgttattatggcggttgtgaatatgtagatattattgaacagttagcaattgac
cgtgcaaaagaattatttggtgcagattatgctaacgtacagccacattctggctcacaa
gcaaatgctgctgtatatatggcattattaaatccaggcgataccattttaggtatgagt
ttagctcatggtggtcatttaacccacggagcttccgttagtttctctggtaaagtctat
aaagcagagcaatatggcattactgctgaaggtttcatcgattacgatgctttgcgtaaa
caagcacaagaagttaaacctaaaatgattgtggcaggtttctctgcgtattcccaattg
attgattgggcaaaaatgcgtgagattgctgatgaagtaggggcttacttatttgtggat
atggcacatgttgcaggcttaattgcggctggtgtttatccaaacccgcttccatatgca
cacgttgttaccactacaacgcataaaacattagctggtcctcgtggtggtttaatttta
tcggcatctggcgatgaagaaatgtataaaaaattgcaatctgcggtattccccgcaggt
caaggcggtccattaatgcacgttattgcggcaaaagctgtttgctttaaagaagctttg
gaacctgaatttaaagcttaccaacaacaagttgtaaaaaatgcgaaagcgatggtagaa
gtgtttaaacaacgtggttttgatgtggtttcaaacgggacagaaaatcatttatttctt
gttagcttcgtaaaacagggcttaacaggtaaagctgctgatgcagctttaggtgcagct
aatattacagttaataaaaactctgtgccaaatgatccacaaaaaccatttattacctca
ggtattcgtgtaggttcaccatctgttactcgtcgtggctttaaagaacaagatgtagta
gcactagcaagctggatgtgtgatgtgttagaaagcattggtaaagataaccacgaacaa
gtaattgcagaaacaaaagcaaaagtactagatatctgtaaacgtctacctgtttatgca
taa
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