Mannheimia pernigra 17CN0883: HV560_05890
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Entry
HV560_05890 CDS
T07233
Symbol
gyrA
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
mpeg
Mannheimia pernigra 17CN0883
Brite
KEGG Orthology (KO) [BR:
mpeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpeg03032
]
HV560_05890 (gyrA)
03400 DNA repair and recombination proteins [BR:
mpeg03400
]
HV560_05890 (gyrA)
Enzymes [BR:
mpeg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HV560_05890 (gyrA)
DNA replication proteins [BR:
mpeg03032
]
Prokaryotic type
DNA Topoisomerases
HV560_05890 (gyrA)
DNA repair and recombination proteins [BR:
mpeg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HV560_05890 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
ApbA
Motif
Other DBs
NCBI-ProteinID:
QLB42372
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Position
1198245..1200947
Genome browser
AA seq
900 aa
AA seq
DB search
MSELAKDIIPVSIEDELKTSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDQNSNTYN
KPHVKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDAPAAM
RYTEVRMQKITQELLTDLDKETVDFSPNYDGKEMIPDVLPTKIPALLVNGSSGIAVGMAT
NIPPHNLGEVLDGCLAYIENEEISIEELMRYIPGPDFPTGAIINGRKGIEDAYRTGRGKV
YVRAKASVESTDKGREQIVVTELPYQVNKAKLIEKIAELVKEKKIEGISKIDDYSDKKGI
SIVIEVKRDAVGEVVLNHLYSLTQMQVTFGINMVALDNGQPKVLNLRQIIEAFVKHRREV
VTRRTIFELRKARERAHILEGLAIALANIDPVIELIRASKTAEEAREGLLARPWALGNVA
PMLEAAGVGASRPEDLPENLGVRDGEYYLSEAQARAILELRLHRLTGLEHEKIVEEYKEL
LTVIGELIHILTSPERLMEVIREELELVKATFNDERRTEITAASGDINIEDLIAQEDVVV
TLSHAGYVKYQPLSDYEAQRRGGKGKSATKMKEDDFIEKLLVANTHDTILCFSSRGRLYQ
LKVYQLPQASRGARGTPIVNILPLVKEENERITAILPIPNGEFSADKFIFMATASGVVKK
VSLDAFSNVRSSGLIALKLREGDELIGVDITDGESEIMLFSAQGRVVRFAEKAVRAMGRT
ATGVRGIKLSTTEISAEEIEEAEIIEMENEDAEDTSSVSLDTDRVVSLVIPHTSGDILTV
TQNGYGKRTIISEYPVKSRATKGVVSIKVNERNGKVVAAVQVEEADQIMLITDAGTLVRT
RAAEVSLVGRNTQGVRIIRTAEDEHVVGLERVCEPEEDDSISEFDNADTNAENVETSTEE
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaattagccaaagatattattcccgtaagtattgaggacgagttaaaaacttct
taccttgattatgcgatgtcggtaattgttgggcgtgcattgcctgacgtgagagacggc
ttaaagcctgttcaccgccgagtgcttttctcaatggatcaaaacagcaacacttataat
aaaccgcacgtgaaatcagcccgtgtagtaggtgatgtgattggtaaataccatccacac
ggtgactctgcggtgtacgacacgattgtgcgaatggctcagccgttctcattgcgttat
atgttggtagatggtcaaggtaacttcggttctatcgatggtgatgcaccagcggcaatg
cgttataccgaagtgcgtatgcagaaaattacccaggaattgctcaccgatttagacaag
gaaacggtggatttctcgccaaactatgacggtaaagagatgattcctgatgtgttgcca
actaaaattccagccttgttagtaaatggttcttcgggcattgcagtgggtatggcaacc
aatattccgccccataatttaggcgaagtgttagacggctgcttagcgtatattgaaaat
gaagagatcagcattgaagagctaatgcgttatattcctggtccagattttccaacaggg
gcgattattaatggtcgtaaagggattgaagacgcttaccgcacaggacgaggcaaagtt
tatgtacgggcaaaagcaagtgtagaaagcacagacaaaggacgtgagcaaattgttgtt
accgagttgccttatcaagtaaacaaagcaaaattaattgaaaaaattgcagagctggta
aaagagaagaaaattgaaggcatcagcaaaattgacgattattcagacaaaaaagggatc
tcgattgttattgaagtaaaacgtgatgcagtgggcgaagtggtgttaaatcacttatat
tcactgactcaaatgcaagttactttcggtatcaatatggtcgcgttagacaacggtcag
ccgaaagtgttgaacctccgccaaatcattgaagcctttgtgaaacaccgccgtgaagta
gtaacacgccgtactatttttgaattacgcaaagcccgtgagcgtgctcatattttagaa
ggcttggcgattgcattagcgaatattgaccctgtcatagagcttatccgtgcttcaaaa
acggctgaagaagcgcgagaaggtttacttgctcgtccttgggcattaggcaacgtagcc
ccaatgttggaagctgctggtgtaggggcttctcgcccagaagatttgcctgaaaactta
ggcgtgcgcgatggcgaatattacttatctgaagctcaagctcgtgcgattttagagtta
cgtttacaccgcttaactggtttagaacacgaaaaaattgttgaagagtataaagaactc
ttaactgtcattggcgaattaattcatattttaactagcccagaacgcttaatggaagtg
atccgtgaagagttagaattagtgaaagccactttcaatgatgaacgccgtacagaaatt
actgccgcctctggtgacatcaacattgaagatttaatcgcccaagaagatgtggtggtc
acgctttcacacgcaggttatgtaaaatatcaaccgctttcagactacgaggcccaacgc
cgtggcggtaaaggaaagtcggcaacaaagatgaaagaagatgatttcatcgaaaaatta
ttggtggcaaacacccacgacaccattctctgcttctcaagccgtggtcgtttatatcaa
ttaaaagtgtatcaactacctcaagctagccgtggggcgagaggcacgccgattgtgaat
attctgcccttggtgaaagaagaaaatgaacgtattaccgcaatccttccaattccaaac
ggcgaatttagtgcggataaatttatctttatggcaactgcaagtggcgtggtgaaaaaa
gtttcgcttgatgcgttcagcaatgttcgatcaagcggtctcattgcattaaaacttcgc
gaaggtgatgaattaattggcgtggacatcacagacggcgagagcgaaattatgctattc
tcagcacaaggtcgagtggttcgttttgcagaaaaagccgtccgtgcaatggggcgtacc
gcaacaggggtgagaggtattaaactttccaccactgaaatttcagcagaagagattgaa
gaagccgaaattattgagatggaaaacgaagacgcggaagatacctcaagcgttagcctt
gataccgatcgcgtggtttcacttgtgattcctcatacctcaggtgacattcttactgta
acgcaaaatggctatggaaaacgcaccataatcagtgaatatccagtgaaatctcgcgca
accaaaggagtggtttcaattaaggtaaacgaacgcaacggcaaagtagtcgccgctgtt
caagttgaggaagctgaccaaattatgctgattactgatgctggcacgctcgttcgcaca
agggctgcagaagttagcctcgttggacgaaatacccaaggcgttcgcattattcgaact
gcagaagatgaacacgttgtcggtctagagcgagtgtgtgagcctgaagaagatgacagt
attagcgaatttgataacgcagacactaatgcagagaatgtagaaacttcaacagaagaa
taa
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