Mannheimia pernigra 17CN0883: HV560_07305
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Entry
HV560_07305 CDS
T07233
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mpeg
Mannheimia pernigra 17CN0883
Pathway
mpeg03410
Base excision repair
mpeg03430
Mismatch repair
mpeg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mpeg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HV560_07305 (recJ)
03430 Mismatch repair
HV560_07305 (recJ)
03440 Homologous recombination
HV560_07305 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpeg03400
]
HV560_07305 (recJ)
DNA repair and recombination proteins [BR:
mpeg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
HV560_07305 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HV560_07305 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HV560_07305 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
QLB42637
UniProt:
A0ABD7A8R0
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All DBs
Position
1519285..1521006
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AA seq
573 aa
AA seq
DB search
MEKLIKKRPLLTTKTLSENTLLNRIYQSRGIKTTKELEHHLQHLHRPQQLANIEQAVDLL
INAFDKQSRIVIVGDFDADGATSTALAIIALRQLGFEQVEYLIPDRFSQGYGLSIAVAEI
VIAKGADLVLTVDNGISSFEGVELLKQNDIQVLITDHHLPPEALPIADAMINPNLPFCTF
PSKSLAGVGVIFYVMMALRARMREQKYFHNKVEPNFAELLDLVALGTVADVVPLDQNNRI
LVYQGLQRIRSGHCRLGIKALAEVSKRELLTLQASDLGFVIAPRLNAAGRLENMSLGVEL
LICNNMDIARQLAFELDSLNQTRKEFEQEMKTEALAICANLPSLSQSQQAHGIVLYQADW
HQGVIGILASRIKDQFHRPVIVFAQESENSECLKGSARSISGLHMRDVLEHINMQYPALI
TKFGGHAMAAGLTIHQTQLNTFKQVFDQTINEILEPEQLQGIIYTDGELAEEDFTIANAE
MFRCAGPWGQHFPEPSFEGEFSILQQKLLAGKHLKLILQSEKGQLLEAIWFHVEVSLFPD
LSAKKAKFVYKLDINEFRDSKRLQLKVEYMRYI
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaaattaattaaaaagcgtcctttattaacgactaaaaccttatctgaaaatacg
ctattaaatcggatttatcaaagtcgaggcataaaaacaacgaaagagttagagcatcat
ctccaacatttacacagaccacaacagcttgccaatattgaacaagcagttgatttatta
attaatgcgtttgataaacaaagccgaattgtgattgtgggcgatttcgatgctgatgga
gcaactagcacagcactggcaattattgcactaagacagctcggttttgaacaggttgag
tacttgattccagatcgtttttcacaaggttatggtttaagcattgcggttgcagaaatt
gttatagcaaagggggctgatttagttttaactgtggataatggtatttcttcgtttgaa
ggcgttgaattactgaaacagaatgatattcaagttctgattaccgatcaccatttaccg
cctgaagcattacctattgctgatgcaatgatcaatcccaatttaccattttgtaccttt
ccttccaaatcgttggcgggtgttggcgttattttttatgtgatgatggcgcttcgcgct
agaatgcgagagcaaaaatattttcataataaagtagaaccaaattttgcagagctttta
gatttagttgctttaggcacggtagcggatgttgtaccgcttgaccaaaataatcgaatt
ttagtatatcaagggcttcaaagaatccgttctggtcattgccgtttggggataaaagca
ttagcggaagtgagtaagcgtgagcttttaaccttacaagcctcagatttaggttttgtg
attgccccaagactgaatgccgcgggcaggcttgagaatatgtctttaggcgttgagttg
ctaatttgtaacaatatggatatagctcgtcagcttgcttttgagctagattcccttaat
caaactcgaaaagagtttgaacaagagatgaaaactgaagccttagcaatttgtgcaaac
ttgccaagtttgtctcaatctcaacaagcccacggtattgtgttatatcaagcagattgg
caccaaggtgtaattggtattcttgcttctcgcattaaagatcaatttcatcgtccagtt
attgtatttgcacaagaaagtgaaaatagtgaatgtttaaaaggttctgcccgttctatt
tcgggcttgcatatgcgagatgtgttggaacatattaatatgcaatatccagcgttaatc
actaaatttggtggacacgcaatggcggcaggtttgacaattcaccaaactcaattaaac
acctttaaacaagtttttgatcaaaccattaatgaaattttagaaccagaacaattacaa
ggcattatttatactgatggagagcttgcagaagaggatttcactattgcaaatgcggaa
atgtttcgttgtgcaggaccttgggggcaacatttcccagagccaagttttgaaggcgaa
tttagtattttgcaacaaaaattattggcaggtaagcatttgaagttgattttacaatcg
gaaaaaggacaattattagaggcaatttggtttcatgttgaggtaagtttatttccagat
ttgtcggctaaaaaggcgaaatttgtgtataaattagatataaatgaattcagagatagc
aaaaggttacaattaaaggttgaatatatgcgttatatttaa
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