Mannheimia pernigra 17CN0883: HV560_07460
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Entry
HV560_07460 CDS
T07233
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mpeg
Mannheimia pernigra 17CN0883
Brite
KEGG Orthology (KO) [BR:
mpeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpeg03032
]
HV560_07460 (topA)
03400 DNA repair and recombination proteins [BR:
mpeg03400
]
HV560_07460 (topA)
Enzymes [BR:
mpeg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HV560_07460 (topA)
DNA replication proteins [BR:
mpeg03032
]
Prokaryotic type
DNA Topoisomerases
HV560_07460 (topA)
DNA repair and recombination proteins [BR:
mpeg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HV560_07460 (topA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QLB42663
LinkDB
All DBs
Position
1548614..1551220
Genome browser
AA seq
868 aa
AA seq
DB search
MGKSLVIVESPAKAKKINQYLGSNYVVKSSVGHIRDLPKSGSDEKSEKAKPISIKGLSAE
EKAKVKAEKERTALVKRMGIDPYNGWKANYQIMPDKEKVVSELKSLAKKADHIYLATDLD
REGEAIAWHLREIIGGEDSRFSRVVFNEITKDAIKKAFEAPQPLNIDRVNSQQTRRFLDR
VVGFMVSPLLWKKVARGLSAGRVQSVAVKLLVEREREIKAFQSEEFWTILANTQINRKKL
PLELTSYKGKKFSAENEKEANIAAHALEQSDFIVSNIESKETSSRASAPFITSSLQRAAS
TRLGFGVKKTMMLAQRLYEAGYITYMRTDSTNLSGEALAMARHYIQENFGANYLPEKANV
YRSKGNAQEAHEAIRPSDVNVNMADLKGMDKDAERLYDLIWRRFLACQMLPARYDSTSLT
VRAGDYELKANGRVMRFDGWTKILPVQGKNPEDQELPAVEINQKLKLDEVVPTQHFTKPP
ARFNEASLVAELEERKIGRPSTYASIISTIQERGYVRTENKRFYVEKIGEVVTDRLNQSF
KDLMNYDFTANMEEVLDQIAEGNKNWKEELNTFFKHFSEELTQAELDELEGGMKPNSLVP
TEIDCPTCARKMAIRTASTGVFLGCTGYALPPKERCKTTMNLIPEAEFLNVLDADSEAKA
LMARKRCPKCDAAMDSYVIDIERKLHVCGNNPNCDGHIVEQGSFKIKGYDGPVVECDKCG
ADMHLKLGRFGKYMGCTSCDNTRKVLKNGEVAPPREDPVAFPELKCEKADAYFVLRDGAS
GVFMSAHNFPKVRESRAPKVAELAKYRDRLPEKLQYLADAPQTDPEGNEAIIRFSRKEKR
QYVTSEKNGKVTKWAVDYVDGKWVERAK
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaatcactcgttattgtggaatctccagcgaaagcgaaaaaaattaatcaatat
cttggtagcaactacgtcgtaaaatcaagcgtagggcatatccgtgatttaccgaaaagc
ggcagtgatgaaaaatcagaaaaagcaaaaccgatttcaatcaaaggtttaagtgcagaa
gaaaaagcaaaagtaaaggcagaaaaagaacgtacagccttagtaaagcgtatgggaatt
gatccatataacggctggaaagcgaattatcaaattatgccagataaagagaaggttgtt
tctgaattaaaatcgctggcgaaaaaagccgatcatatctatctggcaaccgatttggat
agagaaggagaggcgattgcttggcatttacgtgagatcattggtggagaggatagccgt
tttagccgtgtggtatttaatgagataacgaaggacgcgattaaaaaagcttttgaagct
ccgcaaccactcaatattgatcgcgtcaattctcaacaaactcgccgatttttagatcgt
gtcgtgggttttatggtttctccgttattgtggaaaaaagttgctcgtggcttatcagca
gggcgtgtgcaatctgttgcagtgaaacttcttgttgagcgtgagcgtgaaattaaggca
tttcaaagcgaagagttttggacaattttagccaatacgcaaattaatcgtaaaaaatta
ccgcttgaattaacctcttataaaggtaaaaagttctcagctgagaatgaaaaagaagca
aatattgcagcccacgctttagagcaaagtgattttattgtttctaacattgaatcaaaa
gaaacgagctctcgagcttctgcaccattcattacgtcatcgttacaacgtgccgcaagt
acacgtttaggctttggagtaaagaaaactatgatgttagcgcaacgtttgtatgaagct
ggttatattacttatatgcgtactgactctacaaacttaagcggtgaagcgttggcaatg
gctcgtcactacattcaagagaattttggtgcaaattacttgcctgaaaaagctaatgtg
tatcgtagcaaaggcaatgcacaagaagcacacgaggcaattcgtccgtctgatgtgaat
gtaaatatggcagatttgaaaggaatggataaggatgctgagcgtttatatgatttaatt
tggcgtcgttttttagcttgtcaaatgttacctgctcgttatgattctacctcactaacc
gttcgtgcgggtgattacgaattaaaagcgaatgggcgtgttatgcgttttgatggctgg
acaaaaatattaccagtgcaaggtaaaaaccctgaagatcaagaattacccgcagtagaa
ataaatcaaaaattaaaacttgatgaggttgtaccaactcagcatttcactaaaccgcca
gcacgttttaatgaggcttcattggtagcagagcttgaagaacgcaaaattggccgccct
tcaacttacgcctcaattatctcaactattcaagaacgtggctatgttcgtaccgaaaac
aagcgtttttatgtggagaaaattggtgaagtggtaacagatcgtttaaatcaatccttt
aaagatttaatgaattacgattttactgccaatatggaagaagtgctcgaccagattgca
gaagggaacaagaattggaaagaggaattaaatacgttctttaaacatttttccgaagag
ctaacacaggctgaattagatgagctagaaggtggaatgaaaccaaatagtctcgttcca
actgaaattgattgtccgacctgtgctagaaaaatggcaattcgtactgcctctacaggt
gtttttttaggttgtacaggctatgccttgccaccgaaagagcgttgtaaaacgacaatg
aatttaattccagaggctgagtttctaaatgtattagatgctgattcagaagctaaagca
ttaatggctcgcaagcgttgcccgaaatgtgatgctgcgatggatagctatgtaattgat
attgagcgtaaattgcacgtttgtggtaataatccgaattgcgatggacatattgttgag
caaggttcatttaaaattaagggttatgatgggcctgttgtagaatgtgataaatgtggt
gcagatatgcacctaaaattaggtcgatttggcaaatatatgggctgcacgagttgtgat
aatacccgtaaagtattgaaaaatggtgaagttgcaccaccacgagaggatcctgttgcc
ttccctgaattaaaatgtgaaaaagcagatgcgtattttgttttaagagatggggcaagt
ggcgtatttatgtctgcccacaacttcccgaaagtacgcgaaagccgagcaccaaaagtg
gcggagcttgcgaaatatcgtgatagattgcctgaaaaattgcaatatcttgctgatgcg
ccacagacagatcctgaaggcaatgaggcgattattcgctttagtcgtaaagagaagcgt
caatatgtgacttcagagaaaaatggtaaagtgactaaatgggctgttgattacgttgat
ggtaaatgggtagagcgtgctaaataa
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