Mannheimia pernigra 17CN0883: HV560_07675
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Entry
HV560_07675 CDS
T07233
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
mpeg
Mannheimia pernigra 17CN0883
Brite
KEGG Orthology (KO) [BR:
mpeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mpeg03016
]
HV560_07675
Enzymes [BR:
mpeg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
HV560_07675
Transfer RNA biogenesis [BR:
mpeg03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HV560_07675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
CSD2
S1
S1CSD-TOTE-2
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
QLB42704
UniProt:
A0ABD7A983
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All DBs
Position
1600820..1602796
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AA seq
658 aa
AA seq
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MFQDNPLLAQLKQQIEASKEYVEGFVKASEKAFGFLECDKKSYFIPPMEMKKVMHGDLVK
AVVKRDGDKEQVEIDTLLEPMLDRFIAQVHLNKEGKLQLSVDHPSIKQHIPANTHKKVTE
KLENGDWVVAQLKTHPLRDDRFFFAQVTQFICKENDNFAPWWVTLARHEQPCEPVANEKS
YELHDELEREDLTHLYFTTIDSPSTQDMDDALFIEPIKENNAQIGWCLAVAIADPTAYIP
EDSEIEKAARQRCFTNYLPGFNIPMLPRELSDDLCSLVPNEKRPALVAFIETDLESNLTK
EAKFTLAWVESKEKLAYDDVSDYLEGSVNAWQPTSEKTKQQIDWLHQFTQARIKWRANNA
LLFKEQGDYAFELNEDGSVKDIHIEYRRISNQMIEESMIIANISCAQFLSKYAKTGIFNT
HSGFVPKNYELVKSFLLQTLATDENRNELEERYSAERLATLDGYCQMQRDIQDFPEKFLE
LRLRRYLNFAEFKSDVAPHFGLGISHYATWTSPIRKYGDMVNHRLIKQVLLNQEITAVDE
SVLIRLQEARRQNRLVERDIADWLYARYLFPMVAQAVEFECEIADVSRGGLRAKIIQNGA
QIFVPFSTLHNNKDEMEYRQEELAIYIKGEKAYQIGQSVRVKLTEVRLETRSIVGQII
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagataacccccttttagctcaactcaaacaacaaattgaggcaagcaaagaa
tatgtagaaggctttgttaaagcctcagaaaaagcatttggttttttagaatgtgataag
aaaagctatttcattccaccaatggaaatgaaaaaagtaatgcacggtgatttagttaaa
gctgtggtaaaacgtgatggtgataaagaacaagtagaaattgatactctacttgagcca
atgctcgacagatttattgctcaggtgcatttaaataaagaaggaaaattgcaattatcg
gtcgatcatccaagcattaagcaacatattcctgccaacacacacaaaaaagtgactgaa
aaattagaaaacggtgattgggttgttgcccaactaaaaacgcaccccttgcgtgatgat
cgctttttctttgctcaagtaactcaatttatttgtaaagaaaatgataactttgccccg
tggtgggtaacgcttgctcgccacgagcagccttgtgaacctgttgctaatgaaaaaagt
tatgaattgcacgatgaattagaacgtgaagatttaactcacctttatttcaccacgatt
gatagcccaagcacacaagatatggacgatgctttattcatcgaacccatcaaagaaaat
aacgcacaaattggctggtgtttagccgtggcaattgccgatccaaccgcttatattcct
gaagattccgagattgaaaaagctgctcgccaacgttgttttactaactatttacctggt
tttaatattccaatgttaccacgcgagttgtctgatgatctctgctcactcgtaccgaat
gaaaaacgacctgccttagtcgcttttattgagaccgatttagaaagtaacttaactaaa
gaagcaaaattcactttagcttgggtagaatctaaagaaaagctagcttatgatgatgtg
tctgattaccttgaaggctccgtaaatgcgtggcagcctacctcagaaaaaacgaaacag
caaattgattggttacatcaatttacccaagctcgtataaaatggcgtgcaaacaatgca
cttttatttaaagagcaaggggattacgcatttgaattaaatgaagatggttcggtgaaa
gatattcatattgaatatcgccgaatctcaaatcaaatgatcgaagagtcaatgattatt
gccaacatcagctgtgctcaattcttaagcaaatatgcaaaaacaggcatattcaacaca
cattcaggatttgttccgaaaaactacgagttggttaaatcattcttactacaaacctta
gccacagacgaaaaccgtaatgaactggaagaacgctattctgctgaacgcttagcgaca
ttggacggctattgtcaaatgcaacgtgatattcaagattttccagagaagtttttagaa
cttcggttacgtcgctatttaaattttgctgaatttaaatcagacgttgctccccatttt
ggtttaggtatcagccactatgcaacctggacatcacccattcgtaaatatggtgatatg
gtaaatcatcgtttaatcaaacaagtcttattaaaccaagaaataaccgcagttgatgaa
tctgttttaattcgcctacaagaagcccgacgacaaaatcgattagtagaacgcgatatt
gccgactggctttatgcacgttatcttttcccaatggtcgcacaagcggtcgaatttgaa
tgtgaaattgcagatgtctcccgaggcggtttacgtgcaaaaataattcaaaatggtgca
caaattttcgtccccttttcaactttacacaataataaagatgaaatggaataccgccaa
gaagaactcgccatttacattaaaggtgaaaaagcttatcaaatagggcaatccgtacgc
gtaaaactaacagaagtgcggttagaaacgcgttcaattgtagggcaaatcatttaa
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