Mannheimia pernigra 17CN0883: HV560_08065
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Entry
HV560_08065 CDS
T07233
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
mpeg
Mannheimia pernigra 17CN0883
Pathway
mpeg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mpeg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HV560_08065 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpeg03400
]
HV560_08065 (uvrB)
DNA repair and recombination proteins [BR:
mpeg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HV560_08065 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HV560_08065 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
UB2H
DUF5683
EAD9
Motif
Other DBs
NCBI-ProteinID:
QLB42773
UniProt:
A0ABD7A9J1
LinkDB
All DBs
Position
complement(1676254..1678272)
Genome browser
AA seq
672 aa
AA seq
DB search
MSKQHKPFILHAPFSPSGDQPTAIAKLVEGLNDGLAHQTLLGVTGSGKTFTIANVIATLN
RPAMLLAPNKTLAAQLYAEMKSFFPENAVEYFVSYYDYYQPEAYVPASDTFIEKDASINE
QIEQMRLSATKSFLERRDTIVVASVSAIYGLGDVDAYMQMMLHLQVGAMIGQREILSRLA
ELQYTRNDQAFQRSTFRVRGDVIDIYPAESDEVALRVELFDDEIENLSLFDPLTGHNLGK
VPRYTIYPKTHYVTPRERILEAIEQIKSELVERRTYFIQENKLLEEQRIAQRTQFDIEMM
NELGYCSGIENYSRYLSGRKEGEAPPTLFDYMPADGILVIDESHVTVPQIGGMYRGDRSR
KETLVQYGFRLPSALDNRPLKFEEFERLSPQTIYVSATPGAYELEKNPEVVDQVVRPTGL
LDPIIEVRPVATQVDDLLSEIHKRVAVNERVLVTTLTKKMAEDLTDYLDEHGVRVRYLHS
DIDTVERVEIIHDLRMGMFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQT
IGRAARNLNGKAILYGDRITNSMQKAIFETERRREKQIKYNEEKGIVPQALNKKVGELLD
IGQSDKPKRGKQAVKKSENSANEYKPKSRKELEKELKVLEQQMRDFAANLEFEKAAATRD
KLQQLKAVLLEV
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacagcacaaaccttttattcttcacgccccatttagcccctctggtgatcag
ccaactgctattgcaaagctagtcgaaggcttaaatgacggacttgctcatcaaacatta
ttgggtgtaacaggatcggggaaaacattcactattgcaaatgtgattgctacgcttaat
cgtcctgctatgttgcttgccccgaataaaacccttgcggctcagctctatgcggaaatg
aaaagctttttccctgaaaatgcggtggaatattttgtctcctactatgattactaccaa
cccgaagcctatgttccagcaagcgatacctttattgagaaagatgcctcaattaacgag
caaattgagcagatgcgactttctgctactaaatcgttcttggagagacgagataccata
gtagtggcctctgtttccgctatctacggtttaggcgatgttgatgcctatatgcaaatg
atgctgcatttacaagtaggagcgatgattggacaacgggaaattctctctcgtcttgcg
gagctgcaatacactcgcaacgatcaggcatttcaacgttcaactttccgtgtacggggc
gatgtgattgatatttaccccgcagaaagtgatgaagtggcattgcgtgttgagttgttt
gatgatgaaatcgaaaacctctcattgttcgacccgctcacggggcataatttaggcaaa
gtgccacgctacacgatttacccgaaaacgcactatgtcacgccacgagaacgaattcta
gaagccattgagcaaattaaatcggagctggtcgaacgccgcacctactttattcaggaa
aataaactgctggaagaacagcggatcgctcaacgcacgcaatttgatattgagatgatg
aatgagctaggttactgctcgggcattgaaaattattcacgctatctttcggggagaaaa
gagggagaggcaccgcccaccttgtttgattatatgcctgcagacggtattttagtgatt
gatgaaagccatgttaccgtaccacaaatcggcggtatgtatcggggagaccgctcaaga
aaagaaacactggtgcaatatggctttcgactgccgtctgcacttgataaccgtccgctt
aaatttgaggagtttgaacgcctatcaccacaaacaatttatgtatctgccacacctggg
gcgtatgagttagagaaaaatcccgaggtggtcgatcaagttgttcgtccaacaggtttg
cttgaccccattattgaagtccgcccagtggctacgcaggtggacgatttattgtcggaa
attcacaaacgagtagcggtaaacgagcgtgtgttggttactacgcttactaaaaaaatg
gcggaagatctcacggattatctagatgaacacggcgttcgggttcgctacttacatagc
gatatcgatacggtagaacgggtcgagattattcacgacttgcgtatgggaatgtttgat
gtattggtaggaattaacttgctccgtgaaggtttagatatgcctgaggtctcactggta
gcgattttagatgcagacaaagagggttttctccgttctgaacgatcgctgattcagacc
attgggcgagctgcccgaaaccttaacggcaaggcaattttatatggcgatcgtattacg
aactcaatgcagaaagcgatttttgagaccgaacgtcgtcgtgaaaagcagataaaatat
aacgaagaaaaaggcattgtgccacaagcattaaataaaaaagtcggtgagctactcgat
ataggacaatccgacaaaccaaaacgtggcaaacaagcggtcaaaaaatctgaaaattct
gcaaatgaatacaaaccgaaatcccgcaaagagttggaaaaagagctgaaagtgttagaa
caacaaatgcgagattttgccgccaacttagagtttgaaaaagcggctgcaacaagggat
aaactgcagcaattgaaggcggttttattggaagtctaa
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