Mannheimia pernigra 17CN0883: HV560_08170
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Entry
HV560_08170 CDS
T07233
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mpeg
Mannheimia pernigra 17CN0883
Pathway
mpeg03030
DNA replication
mpeg03410
Base excision repair
mpeg03420
Nucleotide excision repair
mpeg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mpeg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HV560_08170 (polA)
03410 Base excision repair
HV560_08170 (polA)
03420 Nucleotide excision repair
HV560_08170 (polA)
03440 Homologous recombination
HV560_08170 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpeg03032
]
HV560_08170 (polA)
03400 DNA repair and recombination proteins [BR:
mpeg03400
]
HV560_08170 (polA)
Enzymes [BR:
mpeg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HV560_08170 (polA)
DNA replication proteins [BR:
mpeg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HV560_08170 (polA)
DNA repair and recombination proteins [BR:
mpeg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HV560_08170 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HV560_08170 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QLB42793
UniProt:
A0ABD7A9S9
LinkDB
All DBs
Position
complement(1695749..1698607)
Genome browser
AA seq
952 aa
AA seq
DB search
MATIAKNPLVLVDGSSYLYRAFHAFPSLTNQNGDPTGAMYGVLNMLKSLIAQVEPSHIAV
VFDAKGKTFRDELFEQYKSHRPPMPDELRAQIQPLHAIIKALGIPLISIEGVEADDVIGT
LAVQAAKDGKDVLISTGDKDMAQLVNDHIMLINTMNNTVLDREGVIEKYGIPPELIIDFL
ALMGDSADNIPGVKGVGEKTALALLQGIGSLKQIYDNLDKIASLSFRGAKSFAPKLAAEK
ENADLSYLLATIKTDVELDVTHHQLLTQAQNRAELTTLFEYYEFKRWLNEVNNNANPLTR
ISAEKVPNHYQVTQAVKKEGNVADPIVIDRSKYETVDTQEKLAAWIGKLNSAKMVAVDTE
TDNLDSMSANLVGISFALENGEACYIPLGHKQKAEQKQVDMFGELGDTDNENSDELVKNQ
LNLTACLTQLKPILEHCGIKKIGQNIKYDLTIFSHYGIELQGVEFDTMIESYTLNSTGRH
NMDELAYRYLGHKTIPFEELAGKGKNQLTFDKIEIPKAAEYAAEDADVTMKLHQVLWQKL
SSEPELVKLFNEIEMPLVSVLSRIERNGVLIDQKKLLTQSAEIEKRLSEIEQLVHAEAGQ
TFNLASTKQLQDILFGKLGLPVLKKTPKGAPSTNEEVLDELAQRGHIVPKLLMEHRGLSK
LKSTYTDKLPQLINKKTGRVHTSYNQAVTATGRLSSSDPNLQNIPIRNEEGRRIRQAFVA
REGYKIVAADYSQIELRIMAHLANDEGMIAAFAEGKDIHRATAAEIFSVALEEVTSEQRR
SAKAINFGLIYGMSSFGLSNQLGIGRAEAQKYMELYFKRYPAVQQFMTDIREVAAEKGYV
ETLFGRRLYLPDIKSSNAILRKAAERVAINAPMQGTAADIIKVAMIGIDKAIRGNHEIKM
IMQVHDELVFEVKADKLEQYSQLIKAEMEKAISLNVPLIAEVGIGDNWDEAH
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atggcaactatcgcaaaaaatccactggtgctagtggacggttcttcttatttatatcga
gcatttcacgcattcccttcgctaactaatcaaaatggagatccaacaggggcaatgtat
ggtgtattgaatatgttaaaaagcctgatcgcacaagtagaacccagccacattgccgtt
gtgtttgacgcgaaaggaaaaacgtttcgtgatgaattgtttgagcaatataaatcgcac
cgtccgccaatgccagatgagttgcgtgctcaaattcaaccgttacacgctattattaaa
gcgttaggtattccactgatttcgattgaaggggtagaggcagatgatgttattggcaca
ttagctgtgcaagcagctaaagatggcaaagatgtgttaattagcactggcgataaagat
atggcacaactggtgaacgatcacattatgttgattaacacaatgaataacaccgtgctt
gatcgggaaggtgttattgaaaaatatggtattccacctgagttgatcatcgacttttta
gccctaatgggagattcagcagataatattcctggcgttaaaggcgttggtgaaaaaacc
gcactcgctttattgcaaggaattgggtcacttaaacagatttatgacaatttagataaa
attgcctcactttcgtttcgtggcgcaaaaagtttcgccccaaaattagccgctgaaaaa
gagaatgctgatttatcttatctgctggcaacgattaaaaccgatgtggaattagacgtt
actcatcatcagcttttaacccaagcacaaaatcgtgcggaactgacgactttatttgaa
tattatgaattcaaacgttggctgaatgaggtaaataataacgccaatccgcttactcgc
atatctgcagagaaagtgcccaatcattaccaagtgacacaagcggttaaaaaagaggga
aatgttgcagatcctatcgtgattgaccgcagtaaatatgaaacggtggacacacaagaa
aaattagcggcttggatcggcaaattgaattcagccaagatggttgcagtggatactgaa
acggataatttagattcaatgtcagccaatttagtggggatttcatttgcgcttgaaaat
ggcgaagcgtgctatattccacttgggcataagcaaaaagcggagcaaaaacaagtagat
atgtttggtgagcttggcgatacagataatgaaaatagtgatgaattggtaaaaaatcag
ctaaatttgaccgcttgtttaacgcaactcaaaccaattttagaacattgtggcataaaa
aaaattgggcagaacatcaaatatgatttaaccattttttctcactatggcattgagtta
caaggcgttgagtttgatacgatgatagaatcgtacaccttaaatagtacaggtcgccat
aatatggatgagttagcttaccgttatttagggcataagactattccatttgaagagttg
gcgggtaaaggcaaaaatcagcttactttcgataaaattgagattcctaaagccgcagaa
tatgccgccgaagatgctgatgtcacaatgaagttacaccaagtgttatggcaaaaatta
tcatcagagcctgagttggtgaaattgtttaacgaaattgaaatgccattggtgagcgtg
ctttctcgtattgaacgcaatggtgtgttaattgaccaaaaaaaattattaacacaatcg
gcagaaattgaaaaacgtttaagtgaaatcgagcagctagttcacgcggaagcaggacag
acgtttaatttagcttcaaccaagcagttacaagacattctatttggcaaattaggctta
ccagttttgaaaaaaacgcccaaaggtgcaccctcgacgaacgaggaagtgttagatgaa
ttggcacagcgagggcatatcgtcccgaaattattaatggaacatcgtggattaagtaaa
ttgaaatcaacatatactgataaacttccacaattaattaataaaaaaacagggcgagta
catacctcatataaccaagcggtaactgcaacagggcgactttcttctagtgatccaaat
ttacagaatattcctatccgcaacgaagagggcagacgaatccgtcaggcattcgttgca
agagaaggctataaaattgttgccgccgactattcccaaattgaactacggattatggcg
catttggccaatgatgaagggatgatcgctgcgtttgcggaaggaaaagatattcaccga
gcaaccgccgcagaaattttcagtgttgcattagaagaggttaccagcgagcaacgccgc
agtgcgaaagcgattaactttggattgatttatggaatgtcatcatttgggctttcaaac
caactcggtattggacgagcagaagcccaaaaatatatggagctctattttaaacgctat
ccagccgtgcagcagtttatgacagatattcgtgaagttgccgcagaaaaaggctatgtg
gaaactttgtttggtcgccgtttatatttgcccgatattaaatcaagcaacgctattttg
cgtaaagcagcggagcgagtggcaattaatgccccaatgcaaggcacggcggcagatatt
atcaaagttgcaatgatcggtattgataaagcgattcgtggtaatcacgagattaaaatg
attatgcaagttcacgatgaattagtgtttgaagtgaaagcagataagctagaacaatac
agccagctcattaaagctgaaatggaaaaagccatttcgcttaacgtaccactgattgca
gaggtcggaattggcgataattgggacgaggctcattaa
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