Mannheimia pernigra 17CN0883: HV560_08240
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Entry
HV560_08240 CDS
T07233
Name
(GenBank) YcaO-like family protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
mpeg
Mannheimia pernigra 17CN0883
Brite
KEGG Orthology (KO) [BR:
mpeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mpeg03009
]
HV560_08240
Ribosome biogenesis [BR:
mpeg03009
]
Prokaryotic type
ribosomal protein modification factors
HV560_08240
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
QLB42806
LinkDB
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Position
complement(1713665..1715428)
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AA seq
587 aa
AA seq
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MSEQTFITGKDAALEESISTFQHKLKNLGFNIEEASWLNPVPNVWSVHIRDADCPQCFSN
GKGASKKAALASALGEYFERLSTNYFWADFYLGQEIANSDFVHYPTEKWFLIEDEDVPPP
EMMDDFLWEYFDPNGELTPELLVDLQSGNYDRGIVTLPYVRQSDNETVYIPQSIIGNLFV
SNGMSAGNTKNEARVQGLSEVFERFVKHRIITEAISLPEIPQSVIDGYPTIKASIEKLEQ
EGFPILCYDASLGGEFPVICVILLNPQNGSCFASFGAHPNFQVAFERTVTELLQGRSLKD
LDVFAPPSFNNEDVADHANMETHFIDSSGLISWDLFKRDADYPFVHWDFSGTTEQEFNNM
MAIFNKHNQPVYIMDYEHLGVYSCRILAPGMSNIYPSDDLIYANNNMGLDWREILLDLPH
FHHDADTYQELLDELDEQSIDDFTRVREFIGVVAEKGSAMQTLRIGELKSMLHLALGNLE
QALDWANWTANMNASVFSAERNNYYRCLISTLELFLDQNREPAQYRSVFEKMYGVEAVEF
AWNAVQGGNPFHGLTASDETLENMIAHQKLLNAYRKVQKAKVNPIVR
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaacaaacttttatcacaggtaaagatgctgctcttgaagagagtatttctacc
tttcaacacaaattaaaaaaccttggctttaatattgaagaagcctcttggttaaatccc
gttccaaacgtgtggtctgtacatattcgtgatgcagattgcccgcaatgtttctcaaac
ggtaaaggagcaagcaaaaaagcagcgttagcttctgcgttaggcgaatattttgagcgt
ttatccactaactatttctgggcggatttctacttagggcaagagattgcgaacagcgat
ttcgtgcattatccaaccgaaaaatggttcctgattgaagatgaagatgtgccaccacca
gaaatgatggatgatttcttatgggaatattttgacccgaatggcgaacttactcctgaa
ttattagtggatttacaatcgggtaactacgatcgtgggatcgtgaccttgccttacgtt
cgtcaatcagacaacgaaaccgtttacattccgcaaagcattatcggtaacttattcgta
tcaaacggtatgtctgcaggtaacaccaaaaacgaagctcgtgtgcaaggtttatccgaa
gttttcgagcgtttcgtaaaacatcgcattatcactgaagcgatcagcttgcctgaaatt
ccgcaatcggtgattgatggctatccaaccattaaggcgtctatcgaaaaattagagcaa
gaaggcttcccgattctttgctacgatgcctcattaggtggcgaattccctgtaatttgt
gtgattttactcaatccacaaaacggctcttgtttcgcctctttcggtgcacacccaaat
ttccaagtcgcatttgagcgtactgtcaccgagcttctgcaaggtcgcagcctcaaagat
ttagatgtgtttgcaccgccgtctttcaataatgaagatgtagccgatcacgcgaatatg
gaaacccattttattgattcaagcggtcttatttcttgggatcttttcaaacgtgatgca
gattatccattcgtgcattgggatttctctggcacaaccgagcaagaatttaataatatg
atggcgattttcaacaagcacaatcagccagtttatattatggattacgagcatttaggt
gtgtactcttgccgtattttagcaccaggaatgtcaaatatttatccaagtgacgacctg
atttatgctaacaataatatgggattagattggcgtgaaattttgttggacctgccacac
ttccatcacgatgcagacacttatcaagaattgcttgatgaattagacgagcaaagcatt
gatgattttacccgtgtccgtgagtttatcggcgtggtagcagaaaaaggctcggcaatg
caaaccttgcgtatcggtgagttgaaatcaatgcttcacttggctctcggcaacttagag
caagccttagattgggcaaactggacggcaaatatgaacgccagcgtcttctcagcagag
cgtaacaattattatcgctgcttaatcagcacgcttgaattatttctagatcaaaaccgt
gaaccggctcaatatcgttctgtattcgagaaaatgtacggcgtggaagcggtggaattc
gcttggaatgcggtgcaaggcggtaatccgttccacggtttaaccgcttctgacgaaacg
ttggaaaatatgatcgctcatcagaaattactcaacgcttaccgcaaagtacagaaagcg
aaagttaatccgattgtgagataa
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