Mannheimia pernigra 17CN0883: HV560_08395
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Entry
HV560_08395 CDS
T07233
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
mpeg
Mannheimia pernigra 17CN0883
Pathway
mpeg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpeg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HV560_08395 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpeg03019
]
HV560_08395 (rhlB)
Enzymes [BR:
mpeg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HV560_08395 (rhlB)
Messenger RNA biogenesis [BR:
mpeg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HV560_08395 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
QLB42835
LinkDB
All DBs
Position
complement(1755145..1756380)
Genome browser
AA seq
411 aa
AA seq
DB search
MSNHLTEHRFIDFPIHTNVLNALNSKGFEFCTPIQAKTFPITLNGNDIAGQAQTGTGKTL
AFLIATFNHLLNNEIETAKNQPRALILAPTRELAVQIGADAQLFLPHCDLKLALAYGGDG
YDKQIQAIEKGVDILVGTTGRVIDYVKQGIIHLDKIQVIVLDEADRMFDLGFIKDIRYLM
RKAPVPTERLTLLFSATLSAKVRELAYEDMDNAEYIEIEPLQRTGHRIKEELFYPSNEDK
MALLLTLLEEEWPDRCMIFANTKHKCEEIWQYLAADGHRIGMLTGDIPQKKRLSLLDNFT
KGNLDILVVTDVAARGLHIPDVTHVFNYDLPDDKEDYVHRIGRTGRAGESGHSISFACER
YAVNLPAIEEYIGHQIPVSQYDKESLLTLPKVNRSRSKKTFLAKTKKNSRN
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatcatcttaccgaacaccgttttattgacttccccattcacacaaatgtactc
aatgcgttgaatagtaaaggcttcgagttctgtacacctatccaagcaaaaactttcccg
attacgcttaacggaaatgatattgcaggacaggctcaaacaggcacaggtaaaacgctt
gcttttttaattgccacgttcaaccatttattaaataacgaaattgagacagcaaaaaat
cagccaagagcattaattcttgcaccaactcgtgagctggcggtacaaatcggggcagat
gcacagctttttttaccacattgcgatcttaaacttgcccttgcttatggtggagatggt
tacgacaagcaaatacaagccatagaaaaaggggtagatattttagttggaaccacaggg
cgtgtgatcgattatgttaagcaagggattattcatttagataaaatccaagtgattgtg
ctagatgaagctgatcgtatgtttgatctcggttttattaaagatattcgttatttaatg
agaaaagctcccgtgcctactgagcgtttaacgttgctcttttcagcaactttatccgct
aaagtacgtgagcttgcttatgaagatatggataatgctgaatatattgagattgaaccg
ctgcaacgcactgggcatcgtataaaagaagagttattttatccgtctaatgaagacaaa
atggcacttttattgactttattggaggaagaatggccagaccgctgtatgatttttgct
aatactaagcataaatgtgaggaaatttggcaatatttagcagccgatggtcatcggatt
ggaatgctaacaggtgatattccacagaaaaaacgcctatctctgttagataattttacc
aaaggtaatttagatattttagtcgtgactgatgtggcagcacgtggattacatattcca
gatgttacgcatgtgtttaattatgatttgcccgatgataaagaggattatgttcatcgt
attggtagaacgggtcgggcaggggagagcggccattcaattagttttgcttgcgagcgt
tatgcggttaatttgcctgcaattgaagagtatattgggcatcagattcctgtgagtcaa
tacgacaaggaatccttactgactttaccgaaagtgaaccgctcaagaagtaaaaaaacg
ttcttggcaaaaacgaaaaagaatagccgtaattaa
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