Mannheimia pernigra 17CN0883: HV560_08900
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Entry
HV560_08900 CDS
T07233
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
mpeg
Mannheimia pernigra 17CN0883
Pathway
mpeg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpeg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HV560_08900 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpeg03019
]
HV560_08900 (groL)
03110 Chaperones and folding catalysts [BR:
mpeg03110
]
HV560_08900 (groL)
03029 Mitochondrial biogenesis [BR:
mpeg03029
]
HV560_08900 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mpeg04147
]
HV560_08900 (groL)
Enzymes [BR:
mpeg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HV560_08900 (groL)
Messenger RNA biogenesis [BR:
mpeg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HV560_08900 (groL)
Chaperones and folding catalysts [BR:
mpeg03110
]
Heat shock proteins
HSP60 / Chaperonin
HV560_08900 (groL)
Mitochondrial biogenesis [BR:
mpeg03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HV560_08900 (groL)
Exosome [BR:
mpeg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HV560_08900 (groL)
Exosomal proteins of other body fluids (saliva and urine)
HV560_08900 (groL)
Exosomal proteins of breast cancer cells
HV560_08900 (groL)
Exosomal proteins of colorectal cancer cells
HV560_08900 (groL)
Exosomal proteins of bladder cancer cells
HV560_08900 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF5891
Motif
Other DBs
NCBI-ProteinID:
QLB42921
UniProt:
A0ABD7A9T4
LinkDB
All DBs
Position
complement(1855449..1857089)
Genome browser
AA seq
546 aa
AA seq
DB search
MAAKDVKFGNDSRVKMLKGVNILADAVKVTLGPKGRNVVLDRAYGAPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI
DKAVAAVVDELKAISKPCETSKEIEQVGTISANSDSTVGQLIAQAMEKVGKEGVITVEDG
TGLEDALDVVEGMQFDRGYLSPYFINKPESGTVELENPYILLVDKKVSNIRELLPVLEGV
AKAGKPLLIIAEDIEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIAILTAGTV
ISEEIGMELEKATLEELGQAKRVVITKDNTTIIDGIGDEAQIKGRVAQIRQQIEDSTSDY
DKEKLQERVAKLAGGVAVIKVGAATEVAMKEKKDRVDDALHATRAAVEEGIVPGGGVALV
RAATKVASTLKGDNEEQNVGIKLALRAMEAPLRQIVANAGEESSVVARNVKEGSGNYGYN
AGTEEYGDMLEMGILDPTKVTRSALQFAASIAGLMITTECMITDLPKEEKLDPAAMGGMG
GMGGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaagacgttaaatttggtaatgattcacgcgtaaaaatgttaaaaggtgtg
aatattttagctgatgcagtaaaagtaactttaggtccaaaagggcgtaatgtagtttta
gatcgtgcttatggtgcaccaactatcactaaagatggggtttcggttgctcgtgaaatc
gaattagaagataaatttgaaaatatgggcgcacaaatggtgaaagaggttgcctctaaa
gccaatgatgcagcgggtgacggtacaaccaccgcaaccgtacttgctcaggctatcgta
aacgaaggtttaaaagcggttgcagcaggtatgaatccaatggatttaaaacgcggcatc
gataaagcagttgctgcagtagttgatgagttaaaagcaatttcaaaaccgtgtgaaacc
tcaaaagagatcgaacaagtcggtacaatttctgccaactcagattcaaccgtaggtcag
ctaattgctcaagcaatggaaaaagtaggcaaagaaggcgtgattactgttgaagacggt
actggtttagaagatgcgttagatgtagttgaaggtatgcagtttgaccgtggttattta
tcgccatatttcattaataagccagaatctggaacggttgaattagaaaatccatacatt
cttttagtggataaaaaggtctctaatattcgtgaattacttcctgtgttagagggggta
gcgaaggctggtaagccattattaattatagcagaagatattgaaggcgaagcattagca
actttagtagtaaacacaatgcgtggtatcgtgaaagtcgctgcggtaaaagccccaggc
tttggcgatcgtcgtaaagcgatgttacaagatattgcgatcttaactgcgggtacggtt
atttctgaagaaattggtatggagcttgaaaaagcaacgcttgaagagcttggtcaagca
aaacgtgtggttatcacaaaagataacacgactattattgatggtattggcgacgaggca
caaattaaaggtcgtgtggctcaaattcgtcagcaaattgaagattcaacttcagattac
gataaagaaaaactgcaagagcgtgtagctaaacttgctggaggtgtggcagtaattaaa
gtgggtgcagccaccgaagtagcaatgaaagagaaaaaagatcgtgttgatgatgcactt
cacgcaactcgtgctgcagttgaagaaggtatcgtaccaggaggcggcgtagcattagtg
cgtgctgcaaccaaagtagcgtcaactttaaaaggcgataacgaagaacaaaatgtgggg
attaaacttgcattgcgtgcaatggaagcgccattacgccaaattgtagcgaatgctggt
gaagagtcctcagtggttgctcgtaacgtgaaagaaggctctggcaattacggctataac
gcagggacagaagagtacggcgatatgcttgaaatggggattttagatccaactaaagtt
acccgttcggcacttcaattcgcagcttctatagcaggtttgatgattacaacagaatgt
atgatcacagatttacctaaagaagaaaaattagatccagctgcaatgggcggtatgggt
ggaatgggcggtatgatgtaa
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