Mannheimia pernigra 17CN0883: HV560_09060
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Entry
HV560_09060 CDS
T07233
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mpeg
Mannheimia pernigra 17CN0883
Pathway
mpeg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpeg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HV560_09060 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpeg03019
]
HV560_09060 (recQ)
03400 DNA repair and recombination proteins [BR:
mpeg03400
]
HV560_09060 (recQ)
Enzymes [BR:
mpeg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HV560_09060 (recQ)
Messenger RNA biogenesis [BR:
mpeg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HV560_09060 (recQ)
DNA repair and recombination proteins [BR:
mpeg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HV560_09060 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
HEM4
Hanta_Gn-B
SKI
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
QLB42947
UniProt:
A0ABD7AAL0
LinkDB
All DBs
Position
1885679..1887478
Genome browser
AA seq
599 aa
AA seq
DB search
MNTTAISVLNNVFGYQKFRDGQEEVINAVLENRDCLVIMTTGGGKSLCYQVPALCLEGIT
LVISPLISLMKDQVDQLITHGIEAAYLNSTQMLEEQQLVEQKALSGQLKLLYLSPEKVMT
QGFFHFISLCKISFIAVDEAHCVSQWGHDFRPEYTLLGRLRNTFPSVPLMALTATADPTT
RADILYHLRLHSPHIYLGSFDRPNIRYTVQEKFKPLEQLLKFINKQQGKSGIIYCNSRKK
VEEITEKLSSRNISVMGYHAGMSFEQREFVQNAFQRDDIQIVVATIAFGMGINKSNVRFV
IHFDLPRSIESYYQETGRAGRDDLPSEAMLFYDPSDYSWLQKILLEEPESEQRDIKQHKL
QAIGEFAESQTCRRLVLLNYFGEHKQEDCKNCDICLDPPQKYDGLLDAQKVMSVIYRTGQ
IFGQHHIIAVLRGMNNLKIREHNHEQLSVYGIGKEQSQHYWQNVVRQLIHLGLIYQNIAN
HSALQLTESARPFLRGEKTLQLALPRLGISTTTFMQKQASHRYDKDLFARLRFLRKQIAD
KENIPPYIVFNDATLQEMAEFLPASKIEMLEINGVGERKFERFGQAFMALIKEHQNNRK
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgaacactaccgcaatttctgttttaaataatgtctttggctatcaaaagttccgagac
gggcaagaagaagtgattaatgctgtcttggaaaatcgtgattgccttgtgattatgaca
actggcggtggaaaatccctttgctatcaagtacctgcactttgtttggaagggattact
cttgttatttcaccactgatttctttaatgaaagaccaagtggatcaactgattactcac
ggcattgaagcagcttatctaaattccactcaaatgcttgaagagcagcaattagtagaa
caaaaagccctatcgggacagttaaaattgctttatctttctcctgaaaaagtgatgact
caaggctttttccactttatttcactctgtaaaattagttttattgcggtagatgaagcc
cattgcgtttctcaatgggggcacgattttcgtcctgaatacacactacttggcagattg
agaaatacgtttcctagcgtgccattaatggcattaactgcaacggctgacccaacaaca
cgagcagatattctataccatttacgcctacattctcctcatatctatctaggcagcttt
gatcgccccaatattcgctatacggtacaagaaaaatttaagccccttgaacaactacta
aaatttatcaataaacagcaaggaaaaagtggcattatttattgtaatagccgtaaaaaa
gtggaagagattacggaaaaactctcctcacgaaatatcagtgttatgggttatcacgca
ggaatgagttttgagcagcgagaattcgtacagaatgccttccaacgagatgatattcaa
attgtagtcgcaactatcgcctttggtatgggaattaataaatcgaatgtgcgttttgtc
atacattttgatttacctcgatcgattgaatcttattatcaagaaacaggcagagctgga
cgagatgatctcccttccgaagctatgcttttttacgatccaagcgattatagctggtta
caaaaaatcctcttagaagagcctgagagcgaacaacgagatattaaacagcataaatta
caagctatcggagaatttgccgaatcgcaaacctgtcgccgattagtcttgcttaattat
tttggcgaacacaaacaagaagattgtaaaaactgtgatatttgcctagatccgcctcaa
aaatatgatggattacttgatgcccaaaaagtaatgtcggtgatttaccgaacaggacaa
atctttggtcaacaccatattattgccgtattgcgaggaatgaataatctgaaaattcgt
gaacacaaccacgaacaactttcagtttatggtatcggaaaagagcaaagccagcactat
tggcaaaatgtggtacgacaactgattcacttagggctgatttatcaaaatattgcgaac
cattcggctctccaattaaccgaaagcgccagacctttcttacgtggtgaaaaaacatta
caactcgcattaccacgtctgggtatttcaaccactacatttatgcaaaaacaagcgagt
caccgttatgacaaagatcttttcgctcgtcttcgtttcttgcgtaaacaaattgccgat
aaagaaaatattccgccttatattgtctttaatgatgcgacactacaggaaatggcggaa
tttttacccgcctcaaaaatcgagatgcttgaaataaatggcgttggggaacgaaaattt
gaacgatttggccaagcatttatggcattaatcaaagaacatcaaaacaaccgaaaatag
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