Mannheimia pernigra 17CN0883: HV560_09765
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Entry
HV560_09765 CDS
T07233
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mpeg
Mannheimia pernigra 17CN0883
Pathway
mpeg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpeg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HV560_09765 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpeg03021
]
HV560_09765 (rho)
03019 Messenger RNA biogenesis [BR:
mpeg03019
]
HV560_09765 (rho)
Transcription machinery [BR:
mpeg03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
HV560_09765 (rho)
Messenger RNA biogenesis [BR:
mpeg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HV560_09765 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
OB_RNB
NACHT
AAA_22
AAA_25
AAA
Motif
Other DBs
NCBI-ProteinID:
QLB43068
LinkDB
All DBs
Position
2062732..2063994
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AA seq
420 aa
AA seq
DB search
MHLTQLKNTPVSELVEMGENQMGLENLARLRKQDIVFAILKQHAKSGEDIFGQGVLEILP
DGFGFLRSSDSSYLAGPDDIYVSPSQIRRFNLQTGDKVEGKIRPPKEGERYFALLKVDSV
NDDKPEVSRSKILFENLTPLHANSRLKMERGNGSKEDLTARILDLAAPIGKGQRALIVAP
PKAGKTVLLQNIAQSITHNHPECELIVLLIDERPEEVTEMQRTVRGEVIASTFDEPASRH
VQVAEMVIEKAKRSVEHKKDVVILLDSITRLARAYNTVTPVSGKILSGGVDANALHRPKR
FFGAARNVEEGGSLTIIATALVDTGSKMDEVIFEEFKGTGNMELHLSRRIAERRIFPAID
FNRSGTRKDDLLMAADELQKTWMLRKVLNPMDDVDAIEWLIDKLMMAKTNEAFFEIMKRS
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcatcttactcaacttaaaaatacgccagtttcagaattagtcgaaatgggtgaaaac
caaatgggcttagaaaatttagctcgtttacgtaaacaagacatcgtttttgctattctt
aaacaacacgcaaaaagtggtgaagatattttcggtcaaggcgtgttagaaattttaccc
gatggttttggtttcttgcgttcatcagatagctcatacttagctgggcccgatgatatt
tatgtttcaccaagccaaatccgccgctttaacttacaaactggtgataaggtagaaggg
aaaatccgcccgcccaaagaaggcgaacgctactttgcattattaaaagtcgattccgtt
aatgatgacaagcctgaagtctctcgtagcaaaatcttatttgaaaacttaacgccttta
cacgcaaattcccgtttgaaaatggagcgtggtaatggctcaaaagaagatttaactgct
cgtattttagatttagcggctcccatcggtaaaggtcagcgagcgttgattgtagcccca
cctaaagcaggtaaaactgttcttctacaaaatatcgcacaaagtattacccataaccac
ccagaatgtgagcttatcgttctgttaattgatgaacgtcctgaagaggtcactgagatg
caacgcacggtgcgtggcgaagtcattgcatctacctttgatgagccagcctcacgacac
gttcaagttgcagaaatggtaatagaaaaagcaaaacgttctgttgaacataaaaaagat
gtggtgattttattagattccatcacacgtcttgctcgtgcttataatactgttacgcct
gtttcaggtaaaattctttctggtggtgtagatgcaaatgcgttacatcgtcctaaacgt
ttcttcggggctgcacgtaacgtagaagaaggcggtagcttaacgattatcgcaacggcg
cttgttgatacagggtctaaaatggatgaggtcatttttgaagaattcaaaggtaccggt
aatatggaactacatctatctcgccgaattgcagaacgccgaatcttccctgcgattgat
ttcaatcgttctggtacacgtaaagatgatctattaatggctgctgatgaactacaaaaa
acgtggatgttgcgtaaagtgcttaatccaatggatgatgtcgatgcaatcgaatggtta
attgataaattaatgatggctaaaaccaacgaggcgttttttgaaattatgaaacgttcg
tga
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