Mannheimia pernigra 17CN0883: HV560_10185
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Entry
HV560_10185 CDS
T07233
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mpeg
Mannheimia pernigra 17CN0883
Pathway
mpeg03420
Nucleotide excision repair
mpeg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mpeg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HV560_10185 (uvrD)
03430 Mismatch repair
HV560_10185 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpeg03400
]
HV560_10185 (uvrD)
Enzymes [BR:
mpeg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HV560_10185 (uvrD)
DNA repair and recombination proteins [BR:
mpeg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HV560_10185 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
HV560_10185 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
QLB43149
UniProt:
A0ABD7AAJ5
LinkDB
All DBs
Position
complement(2149977..2152175)
Genome browser
AA seq
732 aa
AA seq
DB search
MDFSLLLDGLNDKQREAVAAPIGNYLVLAGAGSGKTRVLTHRIAWLIGVENVPESNILAV
TFTNKAAAEMRHRIEHTLAQSGESRLFGMWVGTFHSISNRLLRSHYLDADLPQDFQIMDT
EDQQRLLKRLLKLHNIDEKHFPPKHVAWYINAQKDKGKRAKDIEHHNDPNEKKLVEIYQI
YQDACDRAGLLDFAELLIRAYELFKYKPAILQRYQQRFQQILIDEFQDTNNIQYELIRVL
AGDVGKVMIVGDDDQSIYGWRGAQVENIQRFLKDYHNAQTIRLEQNYRSTSNILTCANEL
IANNDNRLGKNLWTDSGDGEPVDIYCAFNELDEARFVASQIKQWKEDEGDLAECAVLYRS
NSQSRVIEEALIQANIPYRIYGGMRFFERQEIKDALAYLRLIANRQDDAAFERVINTPTR
GIGDRTLDTLRQITRNRQLTLWQAIQLAVQEEQLSGRAASSLLRFVELINALDQETEQMP
LAEQTDYVIKKSGLYEMYKQEKGEKGEVRIENLEELVTATKQFVKPDEAEDLTDLTAFLT
HASLEAGEAQASQHEDYVELMTLHSAKGLEFPRVFMVGVEEGIFPSGMSFDEDRLQEERR
LAYVGITRAKKKLTISYAESRRLYGKEERHIPSRFITELPEKHIREVRLRGSINRAASFN
QLSSFAKNSPKTTASIVDDDSWKMGQKVNHAKFGQGTIINVEGSGEATRLQVAFAGNGIK
WLIAKMANLETL
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggatttctcattattattagatggtttgaatgacaagcaaagagaggctgttgcagcg
cctatcgggaattacttggtactcgcaggggcaggatcgggaaaaacgcgtgttttaacc
catcgcattgcgtggttaattggcgtggaaaatgtacctgaatctaacattttggcagta
acttttactaataaagcggcagcagaaatgcgacatcgtattgagcatacgcttgctcaa
tcgggggagagtcgcctatttggtatgtgggtaggcacttttcatagcatctctaaccgt
ttattacgttctcattatttagatgcagatttaccgcaagatttccaaattatggatacc
gaagatcagcaacgtttactgaaacgtttgttgaaattgcataatattgatgaaaaacat
tttccacctaaacacgttgcgtggtacatcaatgcacaaaaagataagggcaagcgtgct
aaagatatcgaacatcataatgatccgaatgagaagaagctggttgagatttatcagata
tatcaagatgcgtgtgacagagcaggtttattagattttgccgaactacttattcgagct
tacgaattattcaaatataaacctgcgattttacagcgttatcagcagcgttttcagcag
attttaattgatgagtttcaagataccaacaatattcagtatgagctgattcgtgtgtta
gcaggtgatgtcggcaaggtgatgattgtaggcgatgatgaccaatctatttacggctgg
cgtggagcacaagtggaaaatatccagcgttttttaaaggattaccataatgctcaaacc
attcgtttggagcagaactaccgctcaacgagcaatattttaacttgtgcgaatgaatta
attgcgaataacgataatcgcttaggcaaaaatttatggacagacagcggcgatggagag
cctgttgatatttactgtgcgttcaatgagttggatgaagctcgctttgtggcttcacaa
atcaaacaatggaaagaagatgaaggcgatcttgctgaatgtgcagtgttatatcgcagt
aacagccaatctcgtgtgattgaagaagctctaattcaagcgaatattccctaccgtatt
tatggtggtatgcgattttttgaacgccaagaaattaaagatgctttagcttatttacgt
ttgattgctaatcgtcaagatgatgctgcctttgagcgtgttattaacactccaactaga
ggtattggtgatagaacgttagacacacttcgtcaaattacccgtaatcgtcaactcact
ttgtggcaagcgattcaactggcggtgcaggaagaacaactttcagggcgtgcagcttct
tcgttactccgttttgttgagttgattaatgccttagatcaagaaaccgagcagatgccg
ttagctgaacaaactgattatgtcattaaaaaatcaggtttgtatgaaatgtataaacaa
gaaaaaggtgagaagggtgaggttcgcatcgaaaacttagaagagttagtcaccgctacc
aaacaatttgtgaaacctgacgaagcagaagatttaacggatttaactgcttttttaaca
cacgcttcgcttgaagctggagaggcacaagcttcccaacatgaagactatgtagagcta
atgacgttacactctgccaaaggtttagagttccctcgtgtatttatggtaggggtggaa
gaagggatttttccaagtgggatgagttttgatgaagacaggcttcaagaagaacgccgt
ttagcctatgttgggataacacgtgcaaagaaaaaattgactatcagttacgcagaatcc
agacgcttatatggcaaggaagaacgccatatcccttctcgttttattactgaattgcca
gaaaaacatatccgtgaggtgcgtttaaggggctcaattaaccgagctgcgagttttaat
caattgtcctcatttgcaaaaaattccccaaaaacgaccgcttccattgtagatgatgat
agctggaaaatggggcagaaagtcaatcacgccaaatttgggcaaggtacgatcatcaat
gtagaaggctcaggtgaagcgactcgtttacaagtcgcatttgctggaaatggcattaaa
tggttgattgccaaaatggcaaatttggagacattataa
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