Mesotoga prima: Theba_0421
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Entry
Theba_0421 CDS
T02123
Name
(GenBank) putative domain HDIG-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
mpg
Mesotoga prima
Brite
KEGG Orthology (KO) [BR:
mpg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpg03019
]
Theba_0421
Messenger RNA biogenesis [BR:
mpg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Theba_0421
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
tRNA_anti_2
HDOD
TraI_2
Motif
Other DBs
NCBI-ProteinID:
AFK06149
UniProt:
I2F2J6
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All DBs
Position
458791..459852
Genome browser
AA seq
353 aa
AA seq
DB search
MKLRDIIGNEILSQINADQDKTNRDGFPFVSDLRPGSTVLSVFKVHSKRIQEARDGKKFL
LLTLSDKTGAIRAIDWFNAERNDSTLEQGMVVRISGRVAVYEDRIQLNLDSEGIQILQVG
QYDYERFMAVTTKDIPRMYDDLLSLVGRMRDDYIRALLKDIFENDKKFIEKFIVSPAASK
VHHAYKGGLLEHTMSVAELCEFFATKYGDSVDGDLLVAGALLHDIGKVYEYTITPNGIER
TNDGELVGHIAMGIEMVSKAISKIQGFPRYLQTEIKHLLLSHHGEMEWGSPVIPKTTEAI
VLHMADDLDSKVAQFREIEEREFNGSTASWSNYDRFLNRRVFMKNRRSGDSNS
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgaaactccgcgacatcattggaaatgagatattgagtcaaataaatgccgatcaggat
aagacaaacagggatggttttccttttgtttccgatctacgcccgggaagtactgtgcta
tctgttttcaaggtccattctaagagaattcaagaggcccgagacggaaagaagtttctt
ctattaacactttccgataagacaggagctatacgagcaatcgattggtttaatgcagaa
cgcaatgattccactctggaacagggtatggtagtaagaatctccggtcgagtagctgtc
tatgaagatagaatccagcttaatcttgattcggaagggattcagatccttcaggttgga
cagtacgattatgagagatttatggctgtcacaacgaaagatattcctcggatgtacgat
gatcttcttagtctcgttggaagaatgagggatgactatattagagctctgctcaaagat
attttcgagaacgacaagaagttcatcgagaagttcattgtttctccggccgcttctaag
gttcaccacgcttataagggtggccttctggagcacacaatgtctgtcgccgagctatgc
gaattcttcgcgacgaagtacggagactccgttgatggagatcttctagttgcgggggcc
ttgttacatgatatcggtaaagtgtatgagtacacgattactccgaatggaattgagaga
acaaatgacggcgaattagtgggacacatcgctatgggcatagagatggtcagcaaggct
atatctaaaattcagggcttcccccgctatcttcagactgagataaaacatctcctcttg
tctcatcacggggaaatggaatggggctcacccgtaattccaaagacgacggaagcaatt
gttcttcatatggccgacgatttggattcgaaggttgctcagttcagagagattgaagaa
agggaattcaatggctcaactgcttcctggagcaattacgatcgttttcttaacagaaga
gtgttcatgaaaaacagaagatccggcgactcaaatagttag
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