Mesotoga prima: Theba_0708
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Entry
Theba_0708 CDS
T02123
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mpg
Mesotoga prima
Pathway
mpg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Theba_0708
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpg03021
]
Theba_0708
03019 Messenger RNA biogenesis [BR:
mpg03019
]
Theba_0708
Transcription machinery [BR:
mpg03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Theba_0708
Messenger RNA biogenesis [BR:
mpg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Theba_0708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
Spore_III_AA
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AFK06425
UniProt:
I2F3C2
LinkDB
All DBs
Position
746075..747679
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AA seq
534 aa
AA seq
DB search
MSPRKKKTEETPNELDENVVSEKKPTRKRTTRKKTEVKKPEKKEETLSATSNEIERSMKE
NEVSLKGDAEKKMDSESEFQESTSESATDESKELPRKDKDKDKDKDKDNIREVEIDISQL
QAMPIREVYKLARKYDVQGYTQMAKKDLIFAVLKAQTESYGYFFDQGVLEITDGGYGFLR
TLDNNLLPSSNDIYVSQSQIRRFNLTSGDTVAGQVRPPKEGEKYFALLRIEAINHKAINF
AAERITFQNLTPIHPEDRLITETDSHIMSTRMVDLFSPIGKGQRGLIVSPPKAGKTILLK
ELANGIAENHPDTIRIILLIDERPEEVTDLRRSTNAHVIAAPFDMHPEKQIRVAEMTIEM
AKRLVEFNYDVVILLDSITRLARAYNLYVPPSGKLLSGGVDPSALYKPKYFFGAARNIEE
GGSLTIIATALVETGSKMDEVIFEEFKGTGNMELILSRQLANKRMFPSINLTLSGTRREE
LLLPSDILRKIWILRRMLSSMSEEEGLRLIMEKLRGTGSNDEFLDLIEMEKKQY
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
ttgagcccaagaaagaagaaaacggaagaaacaccgaacgaacttgatgaaaatgtcgtg
agtgagaagaagccgaccagaaagagaactacgcgaaagaagactgaagtcaagaagccc
gaaaaaaaggaggaaacacttagcgctacttctaatgagatcgaaagaagcatgaaagaa
aatgaggtttcattaaaaggagatgccgaaaagaagatggattcggaatctgagtttcag
gaatcaactagtgagagcgctacagatgaatcgaaggagcttccaagaaaggacaaagac
aaggacaaagacaaggacaaagacaacataagggaagtcgaaatcgatatctcacagctc
caggcaatgcctatcagagaagtctacaagcttgctaggaagtatgatgtccaaggctat
acgcagatggcaaagaaagacttgatattcgctgttcttaaagcccaaacggaatcttat
ggttacttcttcgatcagggagttcttgaaatcactgacgggggatatggctttctaaga
actctggataacaaccttcttccgagctctaacgacatatatgtgagccagtctcagata
agaagattcaaccttacaagtggcgatacagtggccgggcaggtaagacccccgaaggaa
ggcgagaaatactttgcgctcttgagaatagaggctattaatcacaaggcgataaacttc
gctgcagaaagaattacttttcagaatcttacgccaatccaccctgaagacaggttgatt
accgagacagattctcatataatgagcacaagaatggttgatctcttctccccaattgga
aagggacagcgaggattgatagtttcacctcccaaagcggggaagaccatactgctgaag
gagcttgctaacggaattgccgagaatcacccagacaccataagaataattctgttaatc
gacgagagacctgaagaggtcactgatctcagaagaagcacaaatgctcatgtaatagcc
gccccatttgatatgcatccagagaagcaaattagagtcgcggagatgactatcgaaatg
gcaaaaagattggtcgaattcaattacgatgttgtcattctgctcgacagtattactaga
ctagcaagagcctacaatctatatgttccgcccagcggaaagcttctctccggtggtgtg
gatccttctgctctttacaagcccaaatacttctttggagcggctagaaacatagaagag
ggtggaagccttacgataatcgctacagcgctcgttgaaacggggagcaaaatggatgaa
gttattttcgaagagttcaagggtactggaaatatggaactgattctatctagacagctg
gccaacaagaggatgttcccatcgatcaatcttactctttccggtactagaagagaagaa
ctacttcttccttcagatattctgagaaagatctggattctaagacgaatgctgtcttca
atgtcggaagaagagggattgagactaatcatggagaaacttcgtggcaccggatcaaat
gacgaattcttggacttgattgaaatggaaaagaagcagtactag
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