Monomorium pharaonis (pharaoh ant): 105827748
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Entry
105827748 CDS
T05760
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Pathway
mpha04512
ECM-receptor interaction
mpha04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105827748
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105827748
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mpha04147
]
105827748
00536 Glycosaminoglycan binding proteins [BR:
mpha00536
]
105827748
Exosome [BR:
mpha04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
105827748
Glycosaminoglycan binding proteins [BR:
mpha00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
105827748
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
105827748
NCBI-ProteinID:
XP_028049476
LinkDB
All DBs
Position
Unknown
AA seq
1844 aa
AA seq
DB search
MMRPRAAATSGIIGDAGRGISRPVPLVLRITCVLALLVHAATWIPIAEAVICKDSYKCDC
KGIKGHQGFSGIPGPQGTEGLPGEIGPDGPPGPKGEKGAAGEYGATGEKGYRGDDGIRGF
VGAPGLSGNPGLPGVVGPDGLDGCNGTDGRAGAPGIPGVFGPRGLPGPTGDYGFSGEPGD
GGINSVGSKGIRGNPGIDGLEGYQGPRGFPGDMGYPGDTGDFGAPGPPGLPGLQGDRGDT
VYGVKGQLGEQGDRGEPGPPGKVVEYKKPENSTAVKGPQGPKGMKGFYGDRGRKGEMGAK
GPLGRPGFLGIKGVKGEQGDDGPRGKQGVTGPPGPAGEKGEKGAPGFAGLPGSDGNDGES
GEEGNRGPPGKQGAEGEPGQYIPELDEIIAGNIGIQGDLGPPGEPGESGTPGLPGKVGFI
GPPGPPGPPGIPGLSGAKGSSIKGEQGDDGLPGPMGPQGHSGLPGLPGTMGAKGFPGVTI
TGPPGPDGNLGLPGLSGPPGERGDPGPPGEKGFPGKGIRIRGPTGERGLPGKPGISGPDG
WPGFPGPKGTKGFRGDDCGVCAPGLPGEKGERGESGLDGYPGASGFPGLPGPRGFKGIQG
KRGLQGPAGLQGDSGRSGIAGVQGPKGESGRIFLPPGEKFVGPPGDLGEKGLPGPEGIRG
PRGQPGPIGDTGVPGPKGEKGEHGSPGLPGRDGLPGWDGIPGEKGEDATIPIEFLRGDPG
YPGESGIKGIQGDKGNKGEPGDSAEYTAESRGNKGYKGARGAPGESGFKGLQGHPGDEGL
SGLPGEPGSPGISLQGSIGLKGYPGMPGDQGPRGTSGSPGPQGPVGFPGRIGNKGERGDP
GTNLTYGEIGERGWYGPKGDIGDHGPQGLPGRTGGDGSKGAKGAKGAPGYEGLSGLQGAK
GQHGDSIQGDRGFPGIPGQPGMSGRIGDVGSPGPDGPSGFDGMKGLKGEIGFIGRRGDDG
DVGPQGYQGMHGIQGQPGTPGEKGDVGETGDPGPRGWPGFDGIEGAVGPKGEVGDAGIPG
LPGVTGPLGLKGIRGNTGLEGLAGIPGENSFSGPQGDVGEPGFMGEVGPPGLTGFDGRPG
LPGEPGLATDGFNGLQGQKGEPGFDGYNGIPGPKGEIGDMGPDGLKGERGEQGFPGRPGS
PGISGRHGAKGERGPFGPPGFDGVKGKPGLSGDPGIIGRPGMPGEPGVRGVPGIMGAPGS
KGHVGEPGLPSYAFAQKGDIGNRGHDGFPGVKGQSGEPGYSGMPGLKGQIGDRGYPGSVG
FPGLPGFPGVPGDQGPRGAPGLSGEFAEPGEPGRPGLDGMPGIPGRPGQKGAPGEYGPNG
PKGISGDIGHSLRGPKGMVGEPGPRGFVGLPGIPGLEGLQGFPGAPGPKGFHGEPGWPAG
AAKGQPGEPGWPGLDGRSGPKGMKGDSGLAGFDGLPGPKGERGETGEPGLRGLPGPSGPQ
GPKGERGINPFPPFPRRGLPGDIGEPGLPGFPGLQGMMGEPGKDGLPGRQGETGMIGIPG
PQGPDGKDGPPGYQGPPGTTGRQGQPGFRGTPGIPAPNGIGPRDRGFYFARHSQSEMIPI
CPKNTVKIWEGFSLLHTMGNGRPYAQDLGAAGSCVKKFATMPFLFCNLNNVCDYANRNDY
SYWLSTTEPMPMMMTPIPAPEVGRYISRCSVCEAPTRVIAIHSQSMAIPECPGGWEEIWV
GYSFLMHRDAGADGGGQSLVSPGSCLEEFRVRPFIECRGLGTCNYFATATSYWLATIRNE
EMFRKPLQQTLKADHTSRVSRCTVCLRRRVTEVLKPFTSNSQRAPNNWGTAPVAPNRNVP
DYESRTPPSRGRYPNHRRVPYHYRRRGRVRGNPWERSTESPNNL
NT seq
5535 nt
NT seq
+upstream
nt +downstream
nt
atgatgcggcctagggccgcggcgacgtcggggatcatcggcgacgcgggccgcggcatc
tcgcggccggtcccgctcgtcctacgaatcacctgcgtccttgccctactggtgcacgcc
gccacgtggatcccgatcgccgaggctgtgatctgtaaggactcgtacaaatgcgattgt
aagggaataaagggccatcagggattttctgggatacccgggccccaaggaacggaagga
cttccaggtgagattggacccgatggaccccccggacctaaaggcgagaaaggggcggca
ggagaatatggagccaccggagaaaagggctaccggggcgatgacggtatacgagggttt
gtgggagccccaggactttccggtaatcctggcctgcctggtgtggtgggtccagatgga
ttggacggatgcaacggaactgacggtcgcgctggtgcaccgggtatacccggagttttc
gggcctcgtggtttaccaggacctacgggcgattatggcttttcgggagagcctggcgat
ggaggtataaattcggtcggctccaaaggaattcgcgggaatcccggaatcgatggacta
gagggttatcaaggacctcgcgggttccccggcgacatgggttatccaggagacacgggc
gactttggtgcgccgggtcctcctggcttgccaggtttgcaaggtgatcgtggtgacacc
gtgtacggtgtgaaaggtcagcttggtgaacagggagataggggagagcctggaccaccg
ggcaaggtggtcgaatataagaagccagaaaattcgacggccgtaaagggaccacagggg
ccaaagggtatgaaaggcttttatggcgatcgaggtcgcaagggagagatgggcgccaag
ggtccgctgggtcgaccaggtttcttaggtattaaaggtgtaaaaggtgagcaaggtgat
gatggaccaagaggtaagcaaggtgtcacgggcccgccaggccctgctggtgagaaagga
gagaaaggagctccaggatttgctggactgcctggttcggatggaaacgatggagagtca
ggagaagaaggaaatcgtggtccacctggtaaacaaggagctgagggtgaacctggacaa
tacattccagaacttgatgagattattgccggaaatattggaattcaaggagatcttggc
cctcctggtgaacctggtgaatcaggaacaccgggtctgcccggaaaggtcggcttcata
ggaccaccaggaccaccaggaccaccgggtatccctggtctatcgggagcaaaaggctcg
tccataaaaggagaacaaggagatgatggcttaccagggcctatggggccgcaaggacat
tccggattgcccggtttacctggaactatgggagccaaaggattcccgggagtaacgata
actggaccaccaggaccagacgggaatctaggtcttccaggattatcaggcccacccggt
gaacgcggtgatcctggtcctccaggagagaaaggttttcctggaaaaggaataagaatt
cgtggaccaaccggagaacgaggtctccctggaaaacctggcatctctggacctgatggt
tggcctgggtttcctggtcccaaaggtaccaaaggttttcgaggagatgattgtggcgta
tgtgctccaggattacccggtgaaaaaggagaacgtggtgaatctggtttggacggatat
cctggagcttcaggatttcctggtctacccggaccacgcggattcaaaggaatacaagga
aagcgaggtttgcaaggcccggcgggacttcaaggcgatagcggaagatccggtattgcg
ggagttcaaggacctaaaggagaatcgggaagaatattccttccaccaggtgaaaagttt
gtgggtccacctggtgatttaggcgagaaaggcttacctggccccgaaggaatcagaggt
ccgcgtggacaaccgggacccatcggtgatacaggtgtaccaggaccaaaaggagaaaaa
ggtgaacatggttcccctggattgccgggaagagatggtttgccaggatgggatggcatt
cctggcgaaaaaggtgaagatgccacaataccaatcgagttcttacgcggagatccagga
tatccgggagaatcgggaatcaagggaattcaaggagataagggtaacaaaggagaacct
ggtgactccgcagaatacactgcagagagcaggggcaacaaaggctataaaggtgccaga
ggagctcccggtgaatctggtttcaaaggtctccaaggacatcctggtgatgaaggttta
tcaggtttacctggtgagcccggttctccaggaatttcgcttcaaggttctatcggtttg
aaaggatatcccggaatgccaggagaccagggtcctcgaggcacatcaggctcacctggg
ccacagggaccagtagggtttccgggtcgcattggtaacaaaggcgaacgaggagatccg
ggaacgaatttaacatatggtgagattggagaacgaggatggtatggtccgaagggtgac
atcggtgatcatggtccacaaggattgcctggccgaacaggaggggatggttcaaagggt
gccaagggtgctaagggagcgcctggttacgagggattgtctggacttcaaggagccaaa
ggtcaacatggagacagtatacaaggagatcgtggattcccgggaatacctggccagcct
ggaatgtctggaagaatcggagacgtcggttcccctggtcctgatggtccttccggtttt
gatggaatgaagggcttgaaaggagaaatcggctttatcggacgacgtggtgatgacggt
gacgtgggacctcaaggatatcaagggatgcacggtatacaaggtcaaccgggtactcca
ggagaaaagggagatgtcggcgaaaccggtgatccgggaccacgcggttggcccggtttc
gacggtatagaaggagcagtcggtcctaaaggagaggtgggagacgctggaattcccggt
ttaccaggagtgacaggaccgcttggattaaaaggcatcaggggtaacactggtcttgaa
ggattagcgggaatccctggcgaaaactccttcagcggtccccaaggtgacgtgggtgaa
cctggttttatgggagaagttgggccacctggtttaactggattcgatggacgaccaggt
ttaccgggagaaccaggattagccactgatggtttcaatggcttgcaaggacagaaaggt
gaacctggtttcgacggatataatggtatcccagggccaaaaggagaaattggtgatatg
ggtcctgatggattaaaaggtgaacgaggcgagcaaggctttccaggaagaccagggtca
cctggaatatccggtagacatggtgcgaaaggtgaaaggggcccatttggaccacctggc
tttgacggtgtgaaaggaaaacccggtctcagcggtgatccgggtataataggcagacca
ggaatgccgggtgagccgggtgtgagaggagtcccaggtattatgggtgctcccggatcg
aaaggtcatgtaggtgaacctggtttaccatcttatgcattcgcgcagaagggtgatatt
ggtaatcgcggccacgatggtttccctggtgtgaaaggacaatcaggtgaaccaggatat
agtggtatgcctggtcttaagggtcaaattggagacagaggatatccgggttctgttggt
tttcctggtttacctggtttccctggcgtgccaggtgatcaaggacctcgcggagctcca
ggattgtctggtgaatttgctgaacccggtgaacctggacgtcctggtctcgatggtatg
cctggtatcccaggacgcccaggacaaaaaggagctcctggtgaatatgggccgaacgga
cctaaaggaatttctggcgatataggtcatagccttcgcggtcctaaaggaatggttgga
gaaccaggtccgcgaggatttgtcggcttaccaggtataccaggtttagaaggattgcaa
ggcttccccggagcaccaggaccaaaaggtttccatggagaaccgggatggcctgcaggc
gctgccaaaggacaacccggcgaacccggatggcctggattagatggtcgatctggtccg
aaaggaatgaaaggtgactctggtcttgccggtttcgacggattgccaggaccgaaagga
gaaagaggagaaaccggtgaaccgggcctacgtgggctgcctggtccttcaggaccacag
ggaccgaaaggagaacgtggtataaatcctttcccgccattcccgagacgaggacttccc
ggtgatataggagaaccaggattacctggtttccctggactacagggaatgatgggtgaa
cctggcaaagacggcttgccgggacgacagggtgaaacaggaatgattggaattcctgga
ccgcaaggaccagatggtaaagatggacctcccggttatcaaggacctccaggaacaact
ggacgacaaggacagccaggttttcgtggcacaccaggaatacctgcgccgaatggaatt
ggcccgagggacagaggattctactttgctcgtcattcgcaatccgaaatgataccgatc
tgtccaaagaacaccgtgaagatatgggaaggattttcgctgttgcacactatgggcaat
ggacgaccttacgcgcaggaccttggcgctgctggcagctgcgtcaagaagtttgccact
atgcctttcttattctgtaatctgaataatgtatgtgattacgctaatcgtaacgactat
agttattggctcagcacaaccgagcctatgccaatgatgatgacaccaataccagcaccg
gaagttggtagatacatatcaagatgttctgtgtgcgaagcaccaactagggtaatagct
attcatagtcaatccatggcaatacccgagtgtccgggtggctgggaggaaatctgggtt
ggatacagtttcctcatgcatagagatgctggtgcggacggtggtggccagtctctggtc
tcgcccggatcttgcttggaggagttccgcgttagaccgttcatcgaatgccgcggtctt
ggcacttgcaactacttcgccacagcgacgtcatattggctagcaaccatccgcaacgag
gagatgttccgtaaaccactacagcagacgctcaaagctgaccacacgtcccgagtgagc
cgctgcactgtatgtctccgtcgacgagtcaccgaggttctgaaacccttcacgtccaat
agccaacgggctcccaataattggggcaccgctccggtagcaccaaatcgcaatgtgcct
gattatgaatctaggacaccacctagccggggaagatatcccaatcacagacgcgtaccc
tatcactaccgtagaagaggtcgcgtgcgcggcaatccttgggaacgatcgacagaatct
cctaacaatttgtag
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integrated database retrieval system
