Monomorium pharaonis (pharaoh ant): 105828302
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Entry
105828302 CDS
T05760
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Pathway
mpha03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105828302
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpha03021
]
105828302
03036 Chromosome and associated proteins [BR:
mpha03036
]
105828302
Transcription machinery [BR:
mpha03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
105828302
Coactivators
SAGA/TFTC/STAGA complex
105828302
Chromosome and associated proteins [BR:
mpha03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
105828302
STAGA complex
105828302
TFTC complex
105828302
SAGA complex
105828302
SLIK complex
105828302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_RIG_1st
WDR54
ERp29
Motif
Other DBs
NCBI-GeneID:
105828302
NCBI-ProteinID:
XP_012522019
LinkDB
All DBs
Position
3:2195021..2201356
Genome browser
AA seq
652 aa
AA seq
DB search
MDNDKSTMLAVLQLLKKYNLKGTEELFRKEANLTDISIDDAQQSDSDVTSVLSAYKSEGD
PAQYEKAYSELKKFVEGSLDIYKHELGTILYPVLVHMYLELVYNNHSKEAKQLMEKFSGN
LEEYYQDDLKRLSNVTKREQMAGNELTDTFKSNQFIIRMSRDTLSILKRHLQEKKHSVLL
NIIQEHLYFDMYEGVARNKQQIEATSGAMVGEATRQDNKAKVYYGLLKEPDIQCVAPAEE
EEDDTGGGDGDKPKKKKAKKDPLFSKKTKSDPNAPPVGRMPLPNLKDADKMEKVKALREA
SKRVILGPDTLPSICFYTMLNTVYTVTAAEVAEDSSLLATGFSDSGIKVWSLVPQKLRLM
KTGEQLQDINREAEDVLVRMMDERTSETARNLYGHSGPIYSLSFSPDRNLLLSSSEDTTI
RLWSLHTWTCVVCYKGHLFPVWYVRFSPHGYYFASASNDKTARLWATDSHQPLRIFAGHY
SDVDVIQFHPNSNYVASGSSDMTVRLWDCVTGSQVRLMTGHKGPIFSLAFSTEGRFLASA
GADYRVLVWDLAHGHLVAALSGHTANIHCLSFSRDGNILVSGSLDYTLKLWDFTKLAEEM
SLEDVNVSHNPDVKTNSESYLLRTFATKNTSILALHFSRRNLLLGVGMFEST
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggataacgacaagagtaccatgctcgctgttttgcagcttttgaagaaatacaattta
aaaggaaccgaagaattgtttagaaaggaagctaacctaaccgatatttcaattgatgat
gctcaacaatccgattccgatgtgactagcgtcctttccgcttataaaagtgagggagat
cctgcgcaatatgagaaagcctacagcgaattgaaaaagtttgtagaaggatctttggac
atttataagcatgagttgggcaccatattgtatccagttttggtacatatgtatctggaa
ttagtttataataatcattccaaagaagcaaagcaacttatggaaaagttcagtggaaat
ttagaagaatattatcaggatgacttgaagagattatccaatgtaacaaaacgagagcaa
atggcaggaaacgaattaactgacacttttaaatctaatcagtttataatcagaatgtcg
cgcgatacgctttcgatattaaaacgacatttgcaagaaaagaaacatagtgttttatta
aacatcatacaggaacatctttactttgatatgtacgagggcgttgctcgtaataaacag
cagatagaagcaacatctggagctatggttggagaggctacaaggcaagataacaaggcc
aaagtctattacggacttctgaaggaacctgatattcagtgtgttgcaccagccgaagaa
gaggaagatgatacaggtggcggagatggagataaaccaaagaaaaaaaaggctaagaaa
gatccgttgttttcaaagaagacaaaatctgatccgaatgcaccacctgtcggcagaatg
ccattgccaaatctaaaagatgcagacaaaatggaaaaagtaaaagcattgagggaagca
tcaaagagagttattcttggacctgacacattaccatctatatgtttttatacaatgtta
aacactgtttatactgtaacagcagcagaagtagcagaagattcaagtttattagctact
ggatttagtgattctggcataaaagtatggagtttagtcccacaaaaattgaggttgatg
aaaacgggtgaacaattacaagacatcaatagagaagcagaggatgtattggttagaatg
atggatgaaaggacgtctgagactgcaagaaatctttatggtcacagtggaccaatttat
agtttgtcatttagtccagatagaaatcttctgctttcatcatcagaggatactacaata
aggctgtggtcactgcacacatggacatgtgttgtttgttacaaaggccatttatttccc
gtgtggtacgtaagattctcaccacacggttactactttgcaagtgcctcgaatgacaaa
accgccagattatgggcgactgattctcatcaacctttacgaatatttgctggccattat
tcagatgttgatgtaattcagtttcatccaaattcaaattatgttgcaagcggttcaagc
gatatgaccgtaagattatgggattgtgtaactggcagtcaagttcgattgatgactgga
cataaaggaccgattttttctttagctttctcaacagaagggcgctttttagcatcagcc
ggtgcggattatcgcgtgcttgtatgggatttggcacatggccatcttgtcgcagcctta
tccggccatacggctaatattcattgtctatcgtttagtcgagatggcaatattttagtc
tcaggttctttagattatacactaaaattgtgggactttacaaaattagcggaagagatg
agtttagaagatgtcaatgtttcacacaatccagatgtgaaaactaattcggaatcttac
ctgctacgtacttttgcaacaaaaaatacgtctattctagcattacatttttcacgtaga
aatttactactgggtgtcgggatgtttgaatcaacataa
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