Monomorium pharaonis (pharaoh ant): 105828522
Help
Entry
105828522 CDS
T05760
Name
(RefSeq) E3 ubiquitin-protein ligase parkin isoform X1
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Pathway
mpha04120
Ubiquitin mediated proteolysis
mpha04137
Mitophagy - animal
mpha04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105828522
04120 Ubiquitin mediated proteolysis
105828522
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
105828522
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mpha04131
]
105828522
04121 Ubiquitin system [BR:
mpha04121
]
105828522
03029 Mitochondrial biogenesis [BR:
mpha03029
]
105828522
Enzymes [BR:
mpha01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
105828522
Membrane trafficking [BR:
mpha04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
105828522
Aggrephagy
Other aggrephagy associated proteins
105828522
Xenophagy
Other xenophagy associated proteins
105828522
Ubiquitin system [BR:
mpha04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
105828522
Mitochondrial biogenesis [BR:
mpha03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
105828522
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_14
IBR_2
zf-RING_12
ubiquitin
IBR_1
IBR
Rad60-SLD
Rad60-SLD_2
Motif
Other DBs
NCBI-GeneID:
105828522
NCBI-ProteinID:
XP_012522339
LinkDB
All DBs
Position
2:138111..142573
Genome browser
AA seq
499 aa
AA seq
DB search
MSFWFNLIKNAFFEMLQLFWFGKQKISNSLSIYIKTNTGNTLSVELNPKWDIKNLKEIVA
PRMGIAPEDIKIIFAGKELHNSTIIEECDLGQQSILHAIRTPHKILNKRQDITNSVKKSA
ETINLNDSGSKPMNETLMDLPLDESDQQNLALEEQQENRAHFYVYCSDPCKDVTVGKLRV
KCARCGSGAVTVDRDPQCWPDVLQPRRIIVHCEIDSCPVTSEQNLFNDETDNQVSYARFY
FKCAKHPSLGENDEAVPLYLIKPNLKNIPCLACTDIREVVLVFPCEAGHVTCLDCFREYC
SIRLYERKFEFDTTEGYYTLSCPAGCSDSFIRQVHHFHLLSTEQYERYQRFGTEEYVLRA
GGLLCPRPNCGMGIIPPKDTECRKIQCIGGCDYVFCRICLQGYHVGECESQMLEISTSVF
SSKNYSIDSIRANEAKWEEASRKTIQISTKPCPKCRTPTERDGGCMHIVCTRAGCGYHWC
WICQTEWTRECMAFSTSLG
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgagcttttggtttaatttaataaaaaacgcgtttttcgaaatgttacaactattttgg
tttggcaaacagaagatatcaaattctttaagcatatatattaaaacgaatacaggtaat
acactttctgtcgaattaaatccaaaatgggatataaaaaatctaaaggaaattgtcgca
cctcggatgggaatagcaccagaagatattaaaattatatttgcaggtaaagagctgcac
aattcaactataatagaggaatgtgatttagggcaacaaagcattttacatgctatacgg
acgcctcataaaatactgaataaaaggcaagatatcaccaattctgtaaaaaaatctgca
gagactattaatttaaatgacagtggcagcaaacctatgaacgagacacttatggattta
cctttagatgaatcggatcaacagaatttagccttggaagaacagcaagaaaatcgagca
catttttacgtatactgttcggatccttgtaaagatgtgacggtgggtaaattaagagtc
aaatgtgcaagatgtggtagtggtgctgtaactgtcgatagagatcctcaatgttggcca
gatgtgttgcaaccaaggagaataattgtacattgcgaaattgattcttgtcctgtaact
tcagaacaaaatttgtttaatgatgaaacagataatcaagtttcttatgctcgtttttac
tttaaatgtgccaagcatcccagtttgggagagaacgatgaagctgtacccttatatctt
ataaaaccaaacttaaaaaatatcccttgtttagcttgcacggatatcagagaagttgta
ctggtgtttccatgtgaagctggtcatgtgacttgtcttgactgctttcgtgaatattgc
tcaattcgtttatacgaacggaaatttgagtttgatactactgagggttattacacatta
tcttgccctgctggatgctctgattcctttattcgtcaagttcatcatttccatctactt
agtacagaacagtatgaaagatatcaacgatttggtacagaagaatatgttttacgtgct
ggtgggcttttgtgtccaagacccaattgtgggatgggtattataccaccaaaggataca
gaatgcaggaaaattcagtgcattggtggatgtgactatgtcttttgcagaatttgttta
caaggatatcatgtaggagaatgcgaatcacaaatgttggaaatatctacaagtgttttt
tcttctaaaaattattcaatagattctataagagccaacgaagctaaatgggaggaagct
agcagaaaaacgatacagatatctacaaaaccttgtcccaaatgcagaactcctactgaa
cgagatggaggttgtatgcatatagtgtgtacaagagctggatgtggctatcattggtgt
tggatatgtcaaacagaatggactagagagtgcatggcattttcgaccagcttgggttaa
DBGET
integrated database retrieval system
