Monomorium pharaonis (pharaoh ant): 105829255
Help
Entry
105829255 CDS
T05760
Name
(RefSeq) ATP-dependent RNA helicase dbp2
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Pathway
mpha03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105829255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mpha03041
]
105829255
03009 Ribosome biogenesis [BR:
mpha03009
]
105829255
Enzymes [BR:
mpha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105829255
Spliceosome [BR:
mpha03041
]
Complex A
U1 snRNP components
U1 related factors
105829255
Complex B
105829255
Ribosome biogenesis [BR:
mpha03009
]
Eukaryotic type
Pre-60S particles
Helicases
105829255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Cas3-like_C_2
PRAI
Motif
Other DBs
NCBI-GeneID:
105829255
NCBI-ProteinID:
XP_012523422
LinkDB
All DBs
Position
9:complement(4865053..4872101)
Genome browser
AA seq
616 aa
AA seq
DB search
MAYGERERSDRRGGGGGGGGGARGGGGGRFGGRDGGSGGGSRFSSSGNRDSFGNNNFKNR
QPGERLRKPRWDMSTLPQFRKDFYQPHPNVMARSIHVVEAYRSDKEITVKGANVPGPNIY
FEEGGFPDYVLNEIRRQGFGEPTAIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAIVH
INHQPRLSRNDGPIALILAPTRELAQQIQQVASDFGMSSQVRNTCIFGGAPKGPQARDLE
RGVEICIATPGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQT
LMWSATWPKEVRNLAEEFLTDYIQINIGSLQLAANHNILQIVDVCEEYEKENKLMKLLEE
ISNEPENKTIIFVETKRKVDDITRSINRYGWQAIGIHGDKSQQERDYVLNQFRNSRSAIL
VATDVAARGLDVEDVKFVINLDYPSNSEDYVHRIGRTGRSQRTGTAYAFFTPGNAHKAND
LIQVLEEAKQVVNPKLYDLSRNPGVYKRGRYGGRSGGGGGGRGSGGRGGGSRGTRGGRDT
GDRGGRFDRSSGANANDRGNKWSGSSSGGMGGASYGSSKSFPQNSFGSGTSGGGSNSYSQ
NSSGYGGSSYRQQNGY
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggcatacggagaacgtgaacgttccgacagacgaggaggcggtggtggcggcggcggt
ggtgcgcgcggaggtggaggcggccgattcggcgggcgcgacggaggcagcggaggcggc
agtaggttcagcagcagcggaaaccgagacagcttcgggaacaataactttaagaatcga
caacctggagagcgtttacgtaaaccacgatgggacatgagcactctgccgcagttccga
aaagacttttaccagccgcatccgaacgtgatggcgcggagtattcacgttgtggaggca
tatcgttccgataaagagatcactgtgaagggggctaacgttccgggtcccaatatttat
ttcgaagagggtggttttccagactacgttctcaatgagatacgtagacaaggatttggc
gagcccaccgcgattcaggcacaaggctggcctatcgccctatccggccgagatatggtc
ggtatagcgcaaacgggttcaggaaagacactggcatacatattaccagcaatcgtgcac
ataaatcatcagcccagactaagtagaaatgacggacctatcgcgctgattctggcgccg
actcgggaattagcgcagcaaatacagcaggtcgcgtcggatttcggtatgtcttcacag
gtgcgaaacacgtgcatcttcggtggggccccgaaaggaccacaggcacgcgaccttgag
cgtggggtagagatctgcatcgcgacgccgggtcgtcttatagactttttggagcgtggc
accacgaatctacgtagatgtacatatttagtgctcgacgaggcagataggatgctcgac
atgggttttgagccacaaattaggaaaattgtagaacaaattcgcccggatcgccagact
ctcatgtggtcggcgacgtggccaaaggaagtgcgcaatctcgcggaagagtttctaacg
gactacatacaaattaacattggctccctgcaattggccgctaatcacaatattctgcaa
atcgtggatgtatgcgaagaatacgagaaggagaataaactcatgaaactgctggaagag
atctcgaacgagccggaaaataaaactataatatttgtggaaactaagaggaaagtcgat
gatataacaagatctattaatagatacggatggcaagcaattggtattcatggagacaaa
agccagcaagaaagagattatgtattaaaccagttccggaatagcaggtctgccatcctt
gtggctaccgatgtggcggcgagaggtttagatgtcgaggatgtcaaatttgtgataaac
ttggactatccgtccaactctgaggactatgtgcatcgtattggacgtacgggtcgctcg
caacgtacaggaactgcgtacgccttttttacgcccggaaatgctcataaggctaatgac
ttaatccaggttctagaagaggccaaacaagttgtcaatccgaaactatacgatttatcc
cggaatcctggcgtttataaacgaggacgatatggtggacgtagcggtggtggaggcggc
ggacgaggatccggaggccgcggaggcggttcacgaggtacccgtggaggacgcgacacg
ggagatagaggtggaagattcgaccgctcttccggtgctaacgcgaatgatcgcggcaac
aaatggtccggaagcagtagcggtggcatgggcggagctagctatgggagcagtaaatcg
ttcccccaaaacagcttcgggagtggaacttccggcggtggctccaatagctacagccag
aacagtagcggatacggtggaagcagctacagacaacaaaacggctattga
DBGET
integrated database retrieval system
