Monomorium pharaonis (pharaoh ant): 105829339
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Entry
105829339 CDS
T05760
Name
(RefSeq) nucleoporin Nup43 isoform X1
KO
K14305
nuclear pore complex protein Nup43
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Pathway
mpha03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105829339
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpha03019
]
105829339
03036 Chromosome and associated proteins [BR:
mpha03036
]
105829339
Messenger RNA biogenesis [BR:
mpha03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105829339
Chromosome and associated proteins [BR:
mpha03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
105829339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WDR55
WD40_Prp19
Beta-prop_EIPR1
WD40_CDC20-Fz
WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_EML
Beta-prop_THOC3
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
MIOS_WD40
Beta-prop_pof12
Beta-prop_LRRK2
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
105829339
NCBI-ProteinID:
XP_012523554
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Position
4:27229515..27232410
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AA seq
348 aa
AA seq
DB search
MGENVQGTFVSEKVSKIRWQFGNFTEAKNFLTGSWDNSINKITYWTFRTNYDEETYPVVL
SSYSFLGDVTELKNFQFISKDFFVAASSLGSIRLLQIDEDSCTEFKEHMSWEFIHSFKTM
DYASCTALSTFEQDIASVGEDGKLNLLTAAEKKPVRVIENADSCSIYCVDFLKHNEVLTG
NSRGHMKVWDLRNNCDVPASTFMLSDQVKTAATSITHHPTQKHIVVAGGDDGSLTVWDLR
QNTYPMSQLNAHTKAVSEILFHQDRPDNLFTCSVSGELWHWNNAQSSKLKLDSADMHWLN
TISANGKVNVNSLCAAMHKPINSIDINRSTLLFGCDNEAMYIVRNVLI
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaaatgtgcaaggaacgttcgtgtccgagaaagtttccaaaataaggtggcaa
ttcggaaattttacagaagcaaagaattttttaaccggcagttgggataactcgataaat
aaaataacatattggacattcagaacaaactatgacgaagaaacatatcctgtagtcctg
tcatcatattcattccttggggatgtaactgaactaaagaattttcagtttattagcaaa
gatttctttgttgctgcttcatctttaggatcaataagattattgcaaattgatgaagat
tcctgtactgaatttaaagaacatatgtcatgggagtttatacatagttttaaaacaatg
gattatgcctcatgtaccgcattgtccacgtttgaacaagacatagcttcagtaggagaa
gatggaaagcttaatcttcttacagctgcagaaaagaaaccagttagagttattgaaaat
gctgatagttgctccatatattgtgttgatttcttgaaacataatgaagtacttacggga
aattcaagagggcatatgaaagtttgggatctgagaaataattgtgatgtacccgcatcc
acttttatgctttcagatcaagttaaaacagcagctacgagtattacgcatcatcctacg
caaaagcatattgtggtcgctggtggagacgatggtagtttaaccgtatgggatttaaga
cagaatacttatccaatgtcacaacttaacgcgcatactaaagctgtcagcgagatattg
ttccaccaagacagacctgataatctttttacttgttccgtcagcggagagttgtggcat
tggaacaatgcgcaaagttcgaagctgaaacttgattctgcggacatgcattggttgaat
acaattagcgcaaatggaaaagttaatgtgaattcactgtgcgctgctatgcacaagccg
ataaacagtattgatatcaacagatcaacattgctttttggatgtgacaatgaggctatg
tatattgtaagaaatgtacttatttaa
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