Monomorium pharaonis (pharaoh ant): 105829493
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Entry
105829493 CDS
T05760
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Pathway
mpha04512
ECM-receptor interaction
mpha04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105829493
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105829493
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mpha04147
]
105829493
00536 Glycosaminoglycan binding proteins [BR:
mpha00536
]
105829493
Exosome [BR:
mpha04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
105829493
Glycosaminoglycan binding proteins [BR:
mpha00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
105829493
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
105829493
NCBI-ProteinID:
XP_012523843
LinkDB
All DBs
Position
Unknown
AA seq
1951 aa
AA seq
DB search
MTRLGLRFVASAVCLAGIVSGQLNDTSWLNPPPVLPLERGDIGGPTNDDDNSSPDWKLER
GFITDNEGYDNSERRNGSYTAGNYSPDERTRQWWPYRTNPTGRSYSNRPEFRSEDDENRP
VGYSDGHGDYDTYSGAGESEQRGSPHSQRGSDDSYGSYGRSHGTDSHGRGSAYGRNRGGG
DAYGRGRESGYDGRGSDDAYGGRRRGHEGYGASGDDENYPSNYLVVPMPGAPRNCTGSGC
CVPKCFAEKGSRGPPGIIGPQGPKGQRGFPGAEGLLGPKGEKGDPGPQGPHGVKGDRGKM
GMPGFPGINGVPGMQGSPGSPGLPGRDGCNGTDGERGRDGLPGEPGPRGIKGPQGPKGDK
GQPAYAGAFPVGQKGEPGMDGVRGPPGPPGLQGERGLTGVKGERGPYGTPGLPGPKGEKG
NMGLGFEGLKGDKGQKGEIGSPGSTAPIMPFQGVSEVTGPPGDMGYRGDKGEMGPEGQKG
EPGLIGDHGIPGGIGMKGEKGLPGAPGIRGRDGFSGPPGPPGRKGDRGIDGLEGLSGRPG
KKGEPGRDGPMGVPGLRGPPGPPGGGKGRPGPPGPKGPRGFPGPTGPRGADGFPGDPGPR
GPIGLQGGPGLSGIPGPEGLPGEKGAKGEPGLTGFPGGPGPRGFDGPPGAVGPRGLPGDK
GFSIMGPKGMDGTPGLDGEKGQKGERGYPGVRGRPGDSLDGIPGAPGAPGEPGEAGAPGR
DGIPGLPGGSGEKGDIGGRCIDCLPGLRGAKGDRGLDGIPGLTGPRGPPGERGFPGESGL
DGLPGAIGIPGPPGKDGIPGAPGLQGEPGTPAFVTSSMLKLEKGNKGERGEIGRQGPPGP
EGPPGEKGRPGFEGFPGLKGTPGDRGFPGQDGVPGRPGTPGHKGEKGLSVKGEPGEPGRP
GFSGSKGEPGLVGIKGEAGQCPPLDLLKGFKGDRGLTGDKGEPGPPGYDGLPGDKGLQGF
SGSPGAPGPIGAPGPVGPRGLPGPRGDKGNMGPMGFPGEPGREGPRGFPGAPAPKGDKGE
PGISVKGSPGLTGPPGEKGEKGLPGPPGKEGLPGYQGLPGFVGEKGDLGAPGINGLPGAP
GEKGDTGPIGPPGPPGVAGIPGADGIKGEPGLPGEPGRSGLPGFPGAKGDRGEAGIDGPK
GYPGRRGLPGIPGRPGADGVSGLKGERGDKGSPGFPGLPGMEGKPGRPGISGLKGDQGPP
GTPGLPGLIGYEGPKGDIGLPGPPGRKGEPGEVSEKGQKGEPGMPGIRGPPGPSGRDGID
GSKGEPGRPGIGRDGLPGLKGESGIPGRDGAPGFQGQKGDTGVRGFPGMKGDFGPPGISG
EPGPPGIDGLPGEVGDIGPPGAPGFPGLDGEMGSPGRPGLDGVKGDRGLSGLVGLPGIPG
AAGEKGDRGPPGPTIQVKGEKGEPGISGLPGERGEKGDQGLIGIVGYDGEKGDRGLPGVE
GAPGPHGAPGSKGEQGPPGIPGVPGVTIKGEKGLPGLLGKHGRDGFPGRPGEKGEPGLPG
LPGPKGDIGPYGPVGPQGEKGDQGLQGLTGSPGRDGAPGLEGVPGLPGERGQKGDQGSPG
LFGAPGQKGEPGHPGPSGLDGPQGEKGDRGWDGVNGLPGPVGEKGDRGYPGPVGIMGTVG
YEGQKGEKGEDCIEPPMGPKGDRGYPGPTGPPGAQGEKGLPGPPGFPGLDGIKGAQGFIG
PPGPPGLPGLPGPVGTAGLPGLQGPIGVPGPVGEPGAPCEATPDYLTGILLVKHSQSQSV
PVCEPGHIRLWEGYSLLYTDGDERAHSQDLGYAGSCIRKFSTIPFLFCDVNNVCHYASRN
DRSYWLSTNSPIPMMPVEETAIEEYISRCVVCEVPANVIAVHSQSISIPECPAGWTGLWI
GYSFVMHTGAGAQGGGQSLSSPGSCLEDFRATPFIECNGAKGHCHYYSNQYSFWMVTIED
SQQFRSPEKQTLKAGNLRSRISRCQVCIKNT
NT seq
5856 nt
NT seq
+upstream
nt +downstream
nt
atgacccggttgggattgcgattcgtcgcatccgcagtctgcctggccgggattgttagt
gggcaattaaatgacacatcatggctgaatccaccgccggtcttgccgttggaacgaggt
gatatcggagggcctacaaacgatgacgacaacagttcgccggattggaagttagagaga
gggtttatcacggacaacgaaggatatgataattcggaaaggcggaacggcagttatacg
gctggtaattacagtcctgatgaaaggacgcggcaatggtggccctacaggaccaatcct
acaggtcgatcttattcaaacagacctgagtttcgaagcgaagatgacgaaaatcgacca
gtcggttattccgatggccatggcgattatgatacgtatagcggtgccggtgaaagcgag
caaagaggaagtcctcatagtcaaagaggttctgacgattcctacggcagttacggaaga
agtcatgggacggattcccatggtcgtggaagcgcttatggtcgtaatcgtggaggcggt
gatgcttacggtcgcggtcgagaaagtggatatgacggtcgtggaagtgatgatgcttat
gggggtcgtaggcgcggtcatgagggttacggtgctagtggagacgacgaaaattatccg
agtaattatctggtggtaccgatgccaggagcaccacgaaattgcacgggatcaggttgc
tgcgtgcccaagtgtttcgccgagaagggatcgcggggaccaccaggaataatcgggccg
caaggtcctaagggacaacgaggatttccaggagcagaaggtcttctaggacctaaaggt
gagaagggagatcccggtccgcaaggtccgcatggtgtgaaaggtgacagaggaaaaatg
ggtatgcctggttttcctggcataaacggtgtgcctggaatgcaaggatccccaggttct
ccaggcctgcccggtcgtgacggttgcaacggaacggatggagagcgtgggcgtgatggc
ctacctggagaaccaggacctcgcggtattaaaggtccgcaaggacctaaaggagataag
ggtcaaccagcgtatgctggtgctttcccagttggtcaaaagggtgaacctggtatggac
ggtgtaagaggaccacctggtccccccggtcttcagggagagcgaggtctgactggcgta
aagggtgaacgaggtccctatggtactcctggtttgccgggtccaaaaggagaaaaagga
aatatgggtcttggatttgaaggattaaagggagacaaaggtcaaaagggtgaaatagga
tctccgggttcgaccgcacctatcatgccattccagggagtctcggaagtgacgggtcca
cctggagatatgggttacagaggagataagggtgaaatgggaccagaaggacaaaaagga
gaaccaggacttataggtgatcatggcataccgggaggaataggtatgaaaggagaaaag
ggtcttccaggagctccaggcattcgtggtagagatggtttctctggacctcctggaccc
cctggacgaaaaggtgatcgaggtattgatggattagaaggactttctggacgacctggc
aaaaaaggagaacccggtcgagatggaccgatgggtgtcccaggtttacgaggacctcct
ggtccgccaggaggtggtaaaggaagacctggaccaccaggtccgaaaggaccacgtggt
tttccaggacctaccggaccgcgaggagcagacggttttccaggagacccgggaccaaga
ggacccataggtttacaaggaggtcctggattgtctggaattccaggtccagaaggtttg
ccaggagaaaaaggtgcaaaaggtgaacctggcttgaccgggtttcctggaggtccagga
ccacgtggatttgatggaccaccgggagcggtaggaccacgagggctgccaggagacaaa
ggattctcaataatgggaccaaaaggaatggatggaacgcctggtttagatggagaaaag
ggccagaaaggtgaacggggttatccgggtgttcgaggtcgaccaggagattctctagac
ggtattccaggagcaccgggtgcacctggcgagcccggagaagccggagcaccaggaaga
gatggtataccaggtcttcctggagggtctggagagaaaggagatattggcggtcgttgt
atagattgtttaccgggattgcgaggtgcaaaaggagatcgtggtttggatggtattccc
ggacttaccggacctcgaggaccgcctggagaacgcggtttccctggagaatctgggttg
gatggtctaccaggcgcaatcggcattccaggaccaccgggaaaagatggtatacccggt
gctccaggacttcaaggagaacctggaaccccagcattcgtgacgtcaagcatgctcaag
ctagaaaaaggtaataaaggagagcgaggagagatcggtcgacaaggcccaccaggacca
gaagggcctccgggagaaaagggtagacccggatttgaaggtttcccaggacttaaagga
acgccaggagatcgtggttttcctggacaagatggcgtaccaggaagaccaggtacgcct
ggacacaaaggagagaaaggattaagtgtaaaaggtgaacctggagaaccaggtcgacca
ggattttcaggatcaaaaggagaacctggtctggtcgggattaagggtgaagctggtcaa
tgcccgccacttgaccttttaaaaggcttcaaaggtgatcgaggtttaactggtgacaaa
ggagaacctggaccacctggttatgatggattacctggtgataaaggattgcaaggtttc
tcgggttcacctggtgcacctggtccaatcggtgctcctggacctgtaggtccaagaggt
ttacctggcccgcgtggtgataagggtaacatgggtcctatgggtttcccaggagaacct
ggtcgagaaggacctagaggttttccgggtgctccggctccaaaaggtgacaaaggagaa
cctggaatatcagttaaaggtagtcctggtctaacgggtcctccaggtgaaaaaggagag
aaaggtcttcctggaccacccggaaaagaaggtctacccggttaccagggattaccaggc
tttgttggagagaagggagaccttggcgcaccaggaataaatggtttaccaggagcacct
ggtgaaaaaggagacacaggtccgattggtccacctggtcctccaggtgttgctggtatt
ccaggagcagatggaatcaaaggtgaaccaggattaccaggagagccaggtagatccggt
ctgcctggattccccggagcaaaaggtgatcgcggtgaagcaggtatagatggtccaaaa
ggataccctggcagacgaggattacctggtattccaggaagacctggagctgatggtgta
tcaggtttgaagggtgaacgcggtgacaaaggctcaccaggattccctggattaccgggt
atggaaggaaaacctggtcgtcctggtatatctggactaaaaggagatcaaggaccacct
ggtacgcctggtttaccagggctcattggttatgagggacctaagggtgatattggccta
ccaggtccaccgggaagaaaaggagaaccaggagaagtttcggaaaaaggacagaaaggt
gagccaggaatgcctggaatacgaggtcctccaggtccttcaggacgagatggtatcgat
ggatcgaagggcgaacctggcagaccaggtattggccgtgacggattacctggattaaag
ggtgaatcgggtataccaggtcgggatggagcaccgggattccaaggtcaaaaaggtgat
actggcgtacgaggattcccaggaatgaaaggcgacttcggtccaccgggtatatccggc
gaacctggtccgcctggcatagatggacttcctggagaagttggcgatatcggaccaccg
ggagcacctggtttccctggactcgatggtgagatgggttctcctggtcggcctggactc
gatggtgttaaaggagatcgcggtttatcaggattggtcggattgcctggtattcctgga
gcagctggagaaaaaggagatcgaggacctcctggacctacaatccaggtcaagggtgaa
aaaggtgaaccaggtatttctggacttcctggagaaagaggagagaaaggagatcaaggt
ctgataggtatagttggttatgatggcgaaaaaggtgatcgaggtttacctggagttgaa
ggagcgcctggacctcatggtgctcctggatctaaaggcgaacaaggacctcctggtatt
cccggagttcccggagttacaataaagggcgagaaaggtttgccaggtctattgggtaag
cacggtagagacggatttccgggacgacctggtgagaagggcgaaccaggattgcctggt
ttgcctggaccaaaaggagacattggtccttatggaccagttggaccacaaggtgaaaaa
ggtgatcaaggactacaaggtctgactggatcaccaggacgtgatggagctccaggtctc
gaaggtgtaccaggattacctggtgagagaggtcagaaaggagatcaaggatcacctgga
ttatttggtgccccaggacagaagggagagcccggtcatccaggaccaagtggattagat
ggacctcaaggagaaaaaggtgacagaggttgggatggtgtaaatggtctacctggacca
gttggtgaaaagggtgacagaggataccctggtcccgtcggaataatgggtactgtcggt
tacgaaggtcagaaaggagaaaagggtgaagactgtatcgagcccccaatgggacctaaa
ggagatcgcggataccccggaccgaccgggccgcctggtgcacaaggagagaaaggactt
ccgggtccgcctggtttccccggcttggatggtattaagggcgcccaaggtttcatcggt
ccaccgggacctcctggactgccgggattgcctggacctgtcggaacggcaggtctaccg
ggtcttcaaggtcctatcggtgtgccaggacctgtcggcgagcccggtgcaccgtgcgaa
gcgacacctgactatctcaccggtattcttctggtcaagcacagccaaagtcaaagcgta
ccggtttgcgagccgggtcatattagactctgggagggatacagtttactttacaccgat
ggtgatgagagagcacactctcaagatttaggttacgccggctcgtgtataagaaaattc
tcaacgatacccttcctgttctgcgacgtcaacaacgtctgccattacgctagtcgcaat
gatcgttcttattggctgtctaccaacagccctattcccatgatgcccgtcgaggagacg
gcgatagaagaatatatatccaggtgtgtggtgtgcgaagttccggctaatgtgatagcg
gtacacagtcaatcgataagcattccagaatgtccggcgggatggaccggtctttggatc
ggttatagttttgtaatgcacaccggcgcaggtgcccagggcggcggccagtccctgtcg
agtcctggctcctgcctggaggacttccgcgccacaccgttcatcgagtgtaacggcgcc
aaaggacactgccactactattctaatcagtacagcttctggatggtgaccatagaggac
agccagcagttcaggagccccgagaaacaaacgttaaaggcgggcaatcttagatcccga
ataagtcgctgccaagtgtgtataaagaatacgtaa
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