Monomorium pharaonis (pharaoh ant): 105829493
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Entry
105829493 CDS
T05760
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Pathway
mpha04382
Cornified envelope formation
mpha04512
ECM-receptor interaction
mpha04518
Integrin signaling
mpha04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105829493
04518 Integrin signaling
105829493
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105829493
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
105829493
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mpha04147
]
105829493
00536 Glycosaminoglycan binding proteins [BR:
mpha00536
]
105829493
Exosome [BR:
mpha04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
105829493
Glycosaminoglycan binding proteins [BR:
mpha00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
105829493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
105829493
NCBI-ProteinID:
XP_012523843
LinkDB
All DBs
Position
10:complement(20364327..20388397)
Genome browser
AA seq
1951 aa
AA seq
DB search
MTRLGLRFVASAVCLAGIVSGQLNDTSWLNPPPVLPLERGDIGGPTNDDDNSSPDWKLER
GFITDNEGYDNSERRNGSYTAGNYSPDERTRQWWPYRTNPTGRSYSNRPEFRSEDDENRP
VGYSDGHGDYDTYSGAGESEQRGSPHSQRGSDDSYGSYGRSHGTDSHGRGSAYGRNRGGG
DAYGRGRESGYDGRGSDDAYGGRRRGHEGYGASGDDENYPSNYLVVPMPGAPRNCTGSGC
CVPKCFAEKGSRGPPGIIGPQGPKGQRGFPGAEGLLGPKGEKGDPGPQGPHGVKGDRGKM
GMPGFPGINGVPGMQGSPGSPGLPGRDGCNGTDGERGRDGLPGEPGPRGIKGPQGPKGDK
GQPAYAGAFPVGQKGEPGMDGVRGPPGPPGLQGERGLTGVKGERGPYGTPGLPGPKGEKG
NMGLGFEGLKGDKGQKGEIGSPGSTAPIMPFQGVSEVTGPPGDMGYRGDKGEMGPEGQKG
EPGLIGDHGIPGGIGMKGEKGLPGAPGIRGRDGFSGPPGPPGRKGDRGIDGLEGLSGRPG
KKGEPGRDGPMGVPGLRGPPGPPGGGKGRPGPPGPKGPRGFPGPTGPRGADGFPGDPGPR
GPIGLQGGPGLSGIPGPEGLPGEKGAKGEPGLTGFPGGPGPRGFDGPPGAVGPRGLPGDK
GFSIMGPKGMDGTPGLDGEKGQKGERGYPGVRGRSGDSLDGIPGAPGAPGEPGEAGAPGR
DGIPGLPGGSGEKGDIGGRCIDCLPGLRGAKGDRGLDGIPGLTGPRGPPGERGFPGESGL
DGLPGAIGIPGPPGKDGIPGAPGLQGEPGTPAFVTSSMLKLEKGNKGERGEIGRQGPPGP
EGPPGEKGRPGFEGFPGLKGTPGDRGFPGQDGVPGRPGTPGHKGEKGLSVKGEPGEPGRP
GFSGSKGEPGLVGIKGEAGQCPPLDLLKGFKGDRGLTGDKGEPGPPGYDGLPGDKGLQGF
SGSPGAPGPIGAPGPVGPRGLPGPRGDKGNMGPMGFPGEPGREGPRGFPGAPAPKGDKGE
PGISVKGSPGLTGPPGEKGEKGLPGPPGKEGLPGYQGLPGFVGEKGDLGAPGINGLPGAP
GEKGDTGPIGPPGPPGVAGIPGADGIKGEPGLPGEPGRSGLPGFPGAKGDRGEAGIDGPK
GYPGRRGLPGIPGRPGADGVSGLKGERGDKGSPGFPGLPGMEGKPGRPGISGLKGDQGPP
GTPGLPGLIGYEGPKGDIGLPGPPGRKGEPGEVSEKGQKGEPGMPGIRGPPGPSGRDGID
GSKGEPGRPGIGRDGLPGLKGESGIPGRDGAPGFQGQKGDTGVRGFPGMKGDFGPPGISG
EPGPPGIDGLPGEVGDIGPPGAPGFPGLDGEMGSPGRPGLDGVKGDRGLSGLVGLPGIPG
AAGEKGDRGPPGPTIQVKGEKGEPGISGLPGERGEKGDQGLIGIVGYDGEKGDRGLPGVE
GAPGPHGAPGSKGEQGPPGIPGVPGVTIKGEKGLPGLLGKHGRDGFPGRPGEKGEPGLPG
LPGPKGDIGPYGPVGPQGEKGDQGLQGLTGSPGRDGAPGLEGVPGLPGERGQKGDQGSPG
LFGAPGQKGEPGHPGPSGLDGPQGEKGDRGWDGVNGLPGPVGEKGDRGYPGPVGIMGTVG
YEGQKGEKGEDCIEPPMGPKGDRGYPGPTGPPGAQGEKGLPGPPGFPGLDGIKGAQGFIG
PPGPPGLPGLPGPVGTAGLPGLQGPIGVPGPVGEPGAPCEATPDYLTGILLVKHSQSQSV
PVCEPGHIRLWEGYSLLYTDGDERAHSQDLGYAGSCIRKFSTIPFLFCDVNNVCHYASRN
DRSYWLSTNSPIPMMPVEETAIEEYISRCVVCEVPANVIAVHSQSISIPECPAGWTGLWI
GYSFVMHTGAGAQGGGQSLSSPGSCLEDFRATPFIECNGAKGHCHYYSNQYSFWMVTIED
SQQFRSPEKQTLKAGNLRSRISRCQVCIKNT
NT seq
5856 nt
NT seq
+upstream
nt +downstream
nt
atgacccggttgggattgcgattcgtcgcatccgcagtctgcctggccgggattgttagt
gggcaattaaatgacacatcatggctgaatccaccgccggtcttgccgttggaacgaggt
gatatcggagggccgacaaacgatgacgacaacagttcgccggattggaagttagagaga
gggtttatcacggacaacgaaggatatgataattcggaaaggcggaacggcagttatacg
gctggtaattacagtcctgatgaaaggacgcggcaatggtggccctacaggaccaatcct
acaggtcgatcttattcaaacagacctgagtttcgaagcgaagatgacgaaaatcgacca
gtcggttattccgatggccatggcgattatgatacgtatagcggtgccggtgaaagcgag
caaagaggaagtcctcatagtcaaagaggttctgacgattcctacggcagttacggaaga
agtcatgggacggattcccatggtcgtggaagcgcttatggtcgtaatcgtggaggcggt
gatgcttacggtcgcggtcgagaaagtggatatgacggtcgtggaagtgatgatgcttat
gggggtcgtaggcgcggtcatgagggttacggtgctagtggagacgacgaaaattatccg
agtaattatctggtggtaccgatgccaggagcaccacgaaattgcacgggatcaggttgc
tgcgtgcccaagtgtttcgccgagaagggatcgcggggaccaccaggaataatcgggccg
caaggtcctaagggacaacgaggatttccaggagcagaaggtcttctaggacctaaaggt
gagaagggagatcccggtccgcaaggtccgcatggtgtgaaaggtgacagaggaaaaatg
ggtatgcctggttttcctggcataaacggtgtgcctggaatgcaaggatccccaggttct
ccaggcctgcccggtcgtgacggttgcaacggaacggatggagagcgtgggcgtgatggc
ctacctggagaaccaggacctcgcggtattaaaggtccgcaaggacctaaaggagataag
ggtcaaccagcgtatgctggtgctttcccagttggtcaaaagggtgaacctggtatggac
ggtgtaagaggaccacctggtccccccggtcttcagggagagcgaggtctgactggcgta
aagggtgaacgaggtccctatggtactcctggtttgccgggtccaaaaggagaaaaagga
aatatgggtcttggatttgaaggattaaagggagacaaaggtcaaaagggtgaaatagga
tctccgggttcgaccgcacctatcatgccattccagggagtctcggaagtgacgggtcca
cctggagatatgggttacagaggagataagggtgaaatgggaccagaaggacaaaaagga
gaaccaggacttataggtgatcatggcataccgggaggaataggtatgaaaggagaaaag
ggtcttccaggagctccaggcattcgtggtagagatggtttctctggacctcctggaccc
cctggacgaaaaggtgatcgaggtattgatggattagaaggactttctggacgacctggc
aaaaaaggagaacccggtcgagatggaccgatgggtgtcccaggtttacgaggacctcct
ggtccgccaggaggtggtaaaggaagacctggaccaccaggtccgaaaggaccacgtggt
tttccaggacctaccggaccgcgaggagcagacggttttccaggagacccgggaccaaga
ggacccataggtttacaaggaggtcctggattgtctggaattccaggtccagaaggtttg
ccaggagaaaaaggtgcaaaaggtgaacctggcttgaccgggtttcctggaggtccagga
ccacgtggatttgatggaccaccgggagcggtaggaccacgagggctgccaggagacaaa
ggattctcaataatgggaccaaaaggaatggatggaacgcctggtttagatggagaaaag
ggccagaaaggtgaacggggttatccgggtgttcgaggtcgatcaggagattctctagac
ggtattccaggagcaccgggtgcacctggcgagcccggagaagccggagcaccaggaaga
gatggtataccaggtcttcctggagggtctggagagaaaggagatattggcggtcgttgt
atagattgtttaccgggattgcgaggtgcaaaaggagatcgtggtttggatggtattccc
ggacttaccggacctcgaggaccgcctggagaacgcggtttccctggagaatctgggttg
gatggtctaccaggcgcaatcggcattccaggaccaccgggaaaagatggtatacccggt
gctccaggacttcaaggagaacctggaaccccagcattcgtgacgtcaagcatgctcaag
ctagaaaaaggtaataaaggagagcgaggagagatcggtcgacaaggcccaccaggacca
gaagggcctccgggagaaaagggtagacccggatttgaaggtttcccaggacttaaagga
acgccaggagatcgtggttttcctggacaagatggcgtaccaggaagaccaggtacgcct
ggacacaaaggagagaaaggattaagtgtaaaaggtgaacctggagaaccaggtcgacca
ggattttcaggatcaaaaggagaacctggtctggtcgggattaagggtgaagctggtcaa
tgcccgccacttgaccttttaaaaggcttcaaaggtgatcgaggtttaactggtgacaaa
ggagaacctggaccacctggttatgatggattacctggtgataaaggattgcaaggtttc
tcgggttcacctggtgcacctggtccaatcggtgctcctggacctgtaggtccaagaggt
ttacctggcccgcgtggtgataagggtaacatgggtcctatgggtttcccaggagaacct
ggtcgagaaggacctagaggttttccgggtgctccggctccaaaaggtgacaaaggagaa
cctggaatatcagttaaaggtagtcctggtctaacgggtcctccaggtgaaaaaggagag
aaaggtcttcctggaccacccggaaaagaaggtctacccggttaccagggattaccaggc
tttgttggagagaagggagaccttggcgcaccaggaataaatggtttaccaggagcacct
ggtgaaaaaggagacacaggtccgattggtccacctggtcctccaggtgttgctggtatt
ccaggagcagatggaatcaaaggtgaaccaggattaccaggagagccaggtagatccggt
ctgcctggattccccggagcaaaaggtgatcgcggtgaagcaggtatagatggtccaaaa
ggataccctggcagacgaggattacctggtattccaggaagacctggagctgatggtgta
tcaggtttgaagggtgaacgcggtgacaaaggctcaccaggattccctggattaccgggt
atggaaggaaaacctggtcgtcctggtatatctggactaaaaggagatcaaggaccacct
ggtacgcctggtttaccagggctcattggttatgagggacctaagggtgatattggccta
ccaggtccaccgggaagaaaaggagaaccaggagaagtttcggaaaaaggacagaaaggt
gagccaggaatgcctggaatacgaggtcctccaggtccttcaggacgagatggtatcgat
ggatcgaagggcgaacctggcagaccaggtattggccgtgacggattacctggattaaag
ggtgaatcgggtataccaggtcgggatggagcaccgggattccaaggtcaaaaaggtgat
actggcgtacgaggattcccaggaatgaaaggcgacttcggtccaccgggtatatccggc
gaacctggtccgcctggcatagatggacttcctggagaagttggcgatatcggaccaccg
ggagcacctggtttccctggactcgatggtgagatgggttctcctggtcggcctggactc
gatggtgttaaaggagatcgcggtttatcaggattggtcggattgcctggtattcctgga
gcagctggagaaaaaggagatcgaggacctcctggacctacaatccaggtcaagggtgaa
aaaggtgaaccaggtatttctggacttcctggagaaagaggagagaaaggagatcaaggt
ctgataggtatagttggttatgatggcgaaaaaggtgatcgaggtttacctggagttgaa
ggagcgcctggacctcatggtgctcctggatctaaaggcgaacaaggacctcctggtatt
cccggagttcccggagttacaataaagggcgagaaaggtttgccaggtctattgggtaag
cacggtagagacggatttccgggacgacctggtgagaagggcgaaccaggattgcctggt
ttgcctggaccaaaaggagacattggtccttatggaccagttggaccacaaggtgaaaaa
ggtgatcaaggactacaaggtctgactggatcaccaggacgtgatggagctccaggtctc
gaaggtgtaccaggattacctggtgagagaggtcagaaaggagatcaaggatcacctgga
ttatttggtgccccaggacagaagggagagcccggtcatccaggaccaagtggattagat
ggacctcaaggagaaaaaggtgacagaggttgggatggtgtaaatggtctacctggacca
gttggtgaaaagggtgacagaggataccctggtcccgtcggaataatgggtactgtcggt
tacgaaggtcagaaaggagaaaagggtgaagactgtatcgagcccccaatgggacctaaa
ggagatcgcggataccccggaccgaccgggccgcctggtgcacaaggagagaaaggactt
ccgggtccgcctggtttccccggcttggatggtattaagggcgcccaaggtttcatcggt
ccaccgggacctcctggactgccgggattgcctggacctgtcggaacggcaggtctaccg
ggtcttcaaggtcctatcggtgtgccaggacctgtcggcgagcccggtgcaccgtgcgaa
gcgacacctgactatctcaccggtattcttctggtcaagcacagccaaagtcaaagcgta
ccggtttgcgagccgggtcatattagactctgggagggatacagtttactttacaccgat
ggtgatgagagagcacactctcaagatttaggttacgccggctcgtgtataagaaaattc
tcaacgatacccttcctgttctgcgacgtcaacaacgtctgccattacgctagtcgcaat
gatcgttcttattggctgtctaccaacagccctattcccatgatgcccgtcgaggagacg
gcgatagaagaatatatatccaggtgtgtggtgtgcgaagttccggctaatgtgatagcg
gtacacagtcaatcgataagcattccagaatgtccggcgggatggaccggtctttggatc
ggttatagttttgtaatgcacaccggcgcaggtgcccagggcggcggccagtccctgtcg
agtcctggctcctgcctggaggacttccgcgccacaccgttcatcgagtgtaacggcgcc
aaaggacactgccactactattctaatcagtacagcttctggatggtgaccatagaggac
agccagcagttcaggagccccgagaaacaaacgttaaaggcgggcaatcttagatcccga
ataagtcgctgccaagtgtgtataaagaatacgtaa
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