Monomorium pharaonis (pharaoh ant): 105830630
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Entry
105830630 CDS
T05760
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Pathway
mpha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105830630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpha03019
]
105830630
03012 Translation factors [BR:
mpha03012
]
105830630
Enzymes [BR:
mpha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105830630
Messenger RNA biogenesis [BR:
mpha03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
105830630
Translation factors [BR:
mpha03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
105830630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
HA2_N
HA2_C
AAA_22
nSTAND3
NPHP3_N
ResIII
ATPase
NACHT
PhoH
AAA_14
AAA_19
RsgA_GTPase
NB-ARC
Sigma54_activat
ATPase_2
AAA_16
ABC_tran
Motif
Other DBs
NCBI-GeneID:
105830630
NCBI-ProteinID:
XP_012525529
LinkDB
All DBs
Position
2:complement(25080103..25087333)
Genome browser
AA seq
973 aa
AA seq
DB search
MRCACLPGIDAISIAKMSYRRGFRGASNTFMQRNKDEQVQSTSGCGRGQRPPGLRGKEIG
LYYRNKNIERQKRDSAEVLRLSAQTEQRIKIILNNSKSFYNSDSYDSPEHKKSPQFHDMQ
FKRKFLNIIHGDIQQNLAKAMTTKSKLQRNSDIDRILQQEYREKQKEDAYRNMLKFRTKL
PAHKKKSEILQLIDDNQVVVISGETGCGKTTQVAQFILDDELETGNGSVTRIICTQPRRI
SAISVAERVAMERAEKLGRSVGYQIRLEKIPSREQGSILFCTTGVLLQIMKHDPALRDFS
HVILDEIHERTTESDFVITLLKQVIPKRTDLKVLLMSATLNAESFSKYYGNSPMIHIPGF
TYPVQEFYLEDVLSFVNHRFPEEPPEPTGYRKHLKRYKNQQHKKEEFLDILQPYIRQLTA
EKKYETHVINQLQNPLSETLSLELTEKLVRYICNTKGPGAILIFLPGMIDITKLNKMMLD
SGHYPSYKYIIYGLHSRLPTVDQKLIFKEPPSGVRKIIIATSIAETSITIEDVVYVINCG
KIKFGKFDVNKNIQTLEPEWVSLANAKQRRGRAGRVQSGECYHMYTKAREMTFDQYPLPE
MLRTRLEEVILQIKILQLGKVKEFLATVMDPPNLKAIHLSLELLQTLNALDENENLTPLG
YHLAHLPLDPRTGKMILWGALFSCVEPIFAIAASLTFKDAFYCPLGQEEKANKKKLELSM
DQCSDHIALAEALRRYELAHQRGNARQFCREYFLSFNTLKLLSEMKNQFAQYLYEMKFLD
SENPKYINSNKNSNNIALIKTIVCAGLYPNIAVVRRVTKNGIVGWTPEDGSVRIHPSSVN
NRVSQFPSRYLTYFTKQRSTAIFLHDTTCISIPILLFAGPNISLRREKGQYVISNFSFSE
SFICEHETAKMIRELQQALNSLLEYKVTNPATVSWSSFEGDLLNGIIELVSQTEQELGFD
NRNASYHEDFFGD
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgcgatgtgcttgcctgcctggcattgatgcaatctctatagcaaaaatgtcgtaccga
cgcggtttcagaggtgcatcaaacacctttatgcaacgtaacaaagacgaacaagtacaa
tctacatctggatgtggaagaggacaaaggcctcccggactgaggggaaaagaaatagga
ttatattatagaaacaaaaatatagaaagacaaaaaagagatagtgcagaagtgctcaga
ttatcagctcaaacagagcaaagaattaaaattattttgaataattcaaaaagcttttac
aattcagattcttatgatagtcccgagcacaagaaatctcctcagtttcacgatatgcaa
tttaaaagaaaatttttaaacatcatacatggtgatattcaacagaatcttgctaaagct
atgacaacaaagtcaaaattgcaaagaaatagtgacattgacagaatattacaacaggaa
tacagagaaaagcagaaagaggatgcttatcgaaatatgttaaaatttcgaacaaagtta
ccagcgcataagaaaaaatcagaaatattacaactgatagacgataatcaagttgttgtt
attagtggagaaactggatgtggcaaaaccacacaagttgcacaatttatattggatgat
gagttagaaactggaaatggtagtgttacccgaataatttgtacgcagcctagaaggatt
tcagctatttctgttgctgaacgtgtagctatggaaagagcagaaaaacttggaagatct
gtcgggtaccagatacgacttgaaaaaattccatcacgagaacaaggaagtatactgttt
tgtactactggtgtcttactacaaattatgaagcatgatccagcattaagagatttctct
catgtaatattggatgaaattcacgaacgcaccacagaaagtgattttgttatcacatta
ttaaagcaagttattccgaaaagaacagatttaaaagttcttttaatgagtgcaacatta
aatgctgaaagcttttccaaatattatggcaattctccgatgatacatataccgggattc
acctatccagtacaggaattttatttagaagatgttttgtcatttgtaaatcacagattt
cccgaagaaccaccagaacctacaggttataggaaacatttaaaaagatataaaaaccaa
caacataagaaagaagaatttttagatatcttacaaccttatattagacaacttacagcc
gagaagaaatacgaaacacatgttattaatcaattacaaaatccacttagcgaaactctg
tcattggaacttacagaaaaattagttagatatatctgtaatacaaaaggtcctggagct
attcttatttttttacctggtatgatagatataacaaaattaaataaaatgatgttagat
tctggacattatccaagttacaaatacattatctacggccttcattcacgtttgccgaca
gttgatcagaaacttatatttaaagaaccaccttctggtgttcgtaagataatcattgcg
acttctattgctgaaacgtcaataacaatagaagatgtcgtatatgtaataaattgcggt
aaaataaaatttggaaaatttgatgtgaataagaatattcagactttagagcctgaatgg
gtatccttagctaatgccaaacaaagacgtggtagggctggcagagttcaaagtggagaa
tgttatcacatgtatacaaaagcacgagaaatgacatttgatcaatacccattgccagag
atgctcagaacgcgtttggaagaggtaattctgcaaataaaaatcctgcaattagggaaa
gtcaaagaatttctagctaccgtcatggatccaccaaatttaaaagcgattcatctctct
ctcgagttgcttcagacactcaatgctctcgacgaaaacgagaatttaactcctttaggt
tatcatttggcacatttgccacttgatcctagaacaggaaaaatgattttgtggggcgca
ttattctcttgtgtcgaaccaatatttgcaattgctgctagtctcacatttaaagacgct
ttctattgtccactaggacaagaggaaaaggctaataaaaagaaattagagctcagcatg
gatcaatgtagtgatcatattgctctcgcggaagctttaagaagatatgaacttgcacat
caaagaggaaatgcacgccagttttgccgagagtatttcctttctttcaatacactgaaa
cttctttctgaaatgaaaaatcaatttgcacaatatctatatgaaatgaagtttctggac
agcgaaaacccaaagtatataaactctaacaaaaattcgaataacatagcattgataaaa
accattgtttgtgcaggattgtatccgaatatcgctgttgtaaggcgagttactaaaaat
gggatagttggttggacgccggaagacggtagtgtacgcatacatccatcgagcgtaaac
aatagagtttcccaatttcctagtcggtacttgacgtatttcacaaaacaacgctccacc
gctatatttttacatgacactacatgtataagtataccgatcttactgtttgctggacca
aatatatcgctaagacgagaaaaaggacaatatgtaattagtaatttcagtttttcggaa
agttttatttgtgaacatgaaactgcgaaaatgatacgggaacttcaacaagctctaaac
agtttattggaatataaggttacaaatccggcaacggtatcttggtcaagctttgaaggg
gacttgttaaatggaatcattgaactggtctctcaaacagaacaagaattgggttttgat
aatagaaatgcatcttaccatgaagatttctttggcgattga
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